Table 6 Putative orthologs in peach of Arabidopsis genes involved in chromatin modification and flowering located in QTL regions, identified by reciprocal blast analysis
From: Quantitative trait loci affecting reproductive phenology in peach
Complex or pathway | Arabidopsisprotein | Gene model | Putative peach ortholog | Blastp E-value | Genomic location | QTL region |
|---|---|---|---|---|---|---|
Polycomb (PRC2) | CLF | At2g23380 | ppa001213m | 0 | scaffold_7: 15427185 - 15434449 | 7b |
|  | VIL2 | At4g30200 | ppa001943m | 6×10-177 | scaffold_1: 5841849 - 5849018 | 1a |
Polycomb (PRC1) | EMF1 | At5g11530 | ppa000318m | 2×10-32 | scaffold_1: 37002560 - 37008224 | 1b |
Trithorax | PKL | At2g25170 | ppa000228m | 0 | scaffold_1: 33913537 - 33925777 | 1b |
|  | ASH2R | At1g51450 | ppa006686m | 2×10-131 | scaffold_4: 19402413 - 19406234 | 4c |
JMJ domain | REF6 | At3g48430 | ppa000214m | 0 | scaffold_5: 14087553 - 14096069 | 5b |
Histone acetylation | HAC1 | At1g79000 | ppa000162m | 0 | scaffold_3: 1240769 - 1249807 | 3a |
| Â | HAM2 | At5g09740 | ppa005747m | 0 | scaffold_1: 40838319 - 40843052 | 1b |
| Â | HDA6 | At5g63110 | ppa005308m | 0 | scaffold_5: 14461481 - 14464755 | 5b |
Flowering | SVP | At2g22540 | ppa011063m | 8×10-82 | scaffold_6: 18701564 - 18704722 | 6c |
|  | LFY | At5g61850 | ppa006372m | 9×10-87 | scaffold_5: 13116676 - 13119151 | 5b |
|  | TFL1 | At5g03840 | ppa012369m | 1×10-73 | scaffold_7: 14280983 - 14282266 | 7b |