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Table 1 Type-A response regulators in rice.

From: Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa)

Gene namea

Accession no.b

ORF Length (bp)c

Polypeptide length (aa)d

No. of intronse

Chromosome no.f

Genomic locusg

Nearest markerh

      

BAC/PAC name

Accession no.

cM position

 

OsRR1

AJ938070

696

231

5

4

P0076O17

BX548156

65.3

E60696S

OsRR2

AJ938071

759

252

5

2

OSJNBb0038F20

AP005808

81.7–83.6

C499

OsRR3

AJ938072

396

131

3

2

OJ1124_D06

AP004043

157.9

C1470

OsRR4

AJ938073

699

232

4

1

P0431G06

AP003683

169.5

S10581

OsRR5

AJ938074

405

134

4

4

OSJNBb0065J09

AL663010

78.2–81.7

C1558S

OsRR6

AJ938075

513

170

1

4

OSJNBb0004A17

AL606652

123.8

R2231

OsRR7

AJ938076

621

206

4

7

OJ1047_A06

AP003802

53.4

C735

OsRR8

AJ938077

366

121

4

8

OJ1705_C03

AP003962

60.1–60.4

E61839S

OsRR9

AJ938078

606

201

4

11

OSJNBa0059J06

AC123526

8.1–8.6

R642A

OsRR10

AJ938078

606

201

4

12

OSJNBb0034E23

AL928752

12.2

R642B

  1. a Systematic designation given to rice type-A response regulator genes. b cDNA Genbank accession number (OsRR9 and 10 has been assigned the same accession number as they could not be amplified specifically). c Length of open reading frame in base pairs. d Length (number of amino acids) of the deduced polypeptide. e Number of introns present within ORF. f Chromosomal localization of OsRR gene. g Name, accession number and approximate cM position of the BAC/PAC clone in which the corresponding OsRR gene is present. h Nearest marker to the OsRR gene.