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Table 3 A list of 44 microsatellite markers identified in a total of 42 unigenes showing the motif of the repeat unit and the annotation of the unigenes as defined by best-matched Arabidopsis protein (BLASTX E-value < 1e-10).

From: An expressed sequence tag (EST) library from developing fruits of an Hawaiian endemic mint (Stenogyne rugosa, Lamiaceae): characterization and microsatellite markers

Unigene ID

Repeat

Arabidopsis proteome hit

260553

GGCGGCGGCGGCGG

At3g19760.1 – eukaryotic translation initiation factor 4A/DEAD box RNA helicase, putative

260567

ACAACACAACACAACACAA

no hit

260570

AGCAGCAGCAGCAGCAGCAG

At4g16280.1 – flowering time control protein/FCA gamma (FCA)

260579

TGCTGCTGCTGCT

At2g41900.1 – zinc finger (CCCH-type) family protein

260619

ATATATATATA

At3g48860.2 – expressed protein

260625

GATGATGATGATG

At4g16630.1 – DEAD/DEAH box helicase, putative (RH28)

260641

TCATCATCATCA

no hit

260657

CTGCTGCTGCTGCTGCT

no hit

260658

TCGTCGTCGTCG

At5g27540.1 – GTP-binding protein-related

260658

GCCGCCGCCGCCG

At5g27540.1 – GTP-binding protein-related

260664

TTATTATTATTAT

At3g04770.1 – 40S ribosomal protein SA (RPSaB)

260670

ACCACCACCACC

At2g26510.1 – xanthine/uracil permease family protein

260691

TATATATATATAT

no hit

260708

AGAAGAAGAAGAAGAAGAA

no hit

260711

TTCTTCTTCTTCTTC

At2g38410.1 – VHS domain-containing protein/GAT domain-containing protein

260714

AAATAAATAAATAAA

no hit

260715

TGCTTGCTTGCTT

At1g73660.1 – protein kinase family protein

260720

ATACATACATACA

At5g49720.1 – endo-1,4-beta-glucanase KORRIGAN (KOR)/cellulase (OR16pep)

260754

ATTATTATTATT

At1g48600.1 – phosphoethanolamine N-methyltransferase 2, putative (NMT2)

260776

ATATATATATATATATATATATATATATATATATAT

At5g08380.1 – alpha-galactosidase, putative

260779

CGACCCGACCCGAC

no hit

260781

TTATTATTATTA

no hit

260802

ACAACACAACACAACACAACACAACACAA

no hit

260810

ATCATCATCATCA

At5g56350.1 – pyruvate kinase, putative

260811

CTCTCTCTCTC

At5g48150.2 – phytochrome A signal transduction 1 (PAT1)

260853

CCGCCGCCGCCG

At5g13440.1 – ubiquinol-cytochrome C reductase iron-sulfur subunit

260883

CCTCCCCTCCCCTC

At5g46250.1 – RNA recognition motif (RRM)-containing protein

260903

CACCACCACCAC

At3g11400.1 – eukaryotic translation initiation factor 3G/eIF3g

260907

GCTGCTGCTGCT

At5g17920.1 – 5-methyltetrahydropteroyltriglutamate – homocysteine methyltransferase

260915

CCAAACCAAACCAAACCAAACCAAA

At3g12020.1 – kinesin motor protein-related

260925

GCAGCAGCAGCA

At1g03880.1 – 12S seed storage protein (CRB)

260939

GCTGCTGCTGCTGC

At1g80490.2 – WD-40 repeat family protein

260940

ACGAACGAACGAA

no hit

260971

GGCGGCGGCGGC

no hit

260986

AGAAGAAGAAGAAGAA

At1g10040.1 – expressed protein

260996

GCTGCTGCTGCT

At5g17920.1 – 5-ethyltetrahydropteroyltriglutamate – homocysteine methyltransferase

261018

ATTTTATTTTATTTT

At3g29160.3 – Snf1-related protein kinase (KIN11)

261039

TTAATTAATTAATT

At2g45190.1 – axial regulator YABBY1/AFO

261062

GCTGCTGCTGCTGCTGCTG

At2g28000.1 – RuBisCO subunit binding-protein alpha subunit/CHAPERONIN-60ALPHA

261064

ATACATACATACA

At4g23400.1 – major intrinsic family protein/MIP family protein

261094

GAGAGAGAGAG

At1g48410.2 – argonaute protein (AGO1)

261109

ATTCATTCATTCAT

At3g15880.1 – WD-40 repeat family protein

261109

ACCACCACCACC

At3g15880.1 – WD-40 repeat family protein

261131

TAATATAATATAATA

no hit