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Table 2 In-silico comparison of the deduced amino acid sequence of three PR-1 type genes from Malus × domestica

From: PR genes of apple: identification and expression in response to elicitors and inoculation with Erwinia amylovora

Parameter

PR-1a

PR-1b

PR-1c

Signal sequence

24 aa Cleavable

None

19 aa Un-cleavable

Predicted Location

Outside of the cell

Cytoplasm

Plasma membrane

Leaf Accessions

10

0

0

Shoot Accessions

1

0

0

Bud Accessions

2

0

0

Flower Accessions

4

5

5

Fruit Accessions

4

2

1

  1. The deduced amino acid sequences of three different PR-1 type genes from apple were analyzed for their sub-cellular localization using PSort. The number of accessions in GenBank and their source tissue was obtained by tblastn query of National Center for Biotechnology Information Genbank data base using the 17-amino-acid sequence denoted in green in Figure 1.