Skip to main content

Table 6 Arabidopsis (At) and Populus (Pt) rhomboid protease gene models (S54 family in MEROPS) corresponding to the names given in the Lon phylogenetic tree.

From: Protease gene families in Populus and Arabidopsis

At name

At number

Populus Gene model

Pt number

Pt name

AtRbl1

At2g29050

gw1.VI.164.1

Pt426492

PtRbl1.1

  

estExt_Genewise1_v1.C_LG_I1244

Pt706133

PtRbl1.2

  

gw1.IX.4200.1

Pt203735

PtRbl1.3

AtRbl2

At1g63120

estExt_fgenesh4_pm.C_LG_III0384

Pt830825

PtRbl2.1

  

estExt_fgenesh4_pg.C_LG_I0956

Pt815105

PtRbl2.2

AtRbl3

At5g07250

gw1.XII.335.1

Pt432576

PtRbl3.1

  

estExt_fgenesh4_pg.C_LG_XV1114

Pt824920

PtRbl3.2

AtRbl4

At3g53780

   

AtRbl5

At1g52580

   

AtRbl6

At1g12750

   

AtRbl7

At4g23070

   

AtKOM

At1g77860

fgenesh4_pg.C_LG_II000834

Pt754654

PtKOM

AtRbl9

At5g38510

eugene3.01230069

Pt580779

PtRbl9

AtRbl10

At1g25290

estExt_fgenesh4_pg.C_LG_III0079

Pt817004

PtRbl10

AtRbl11

At5g25752

gw1.XVIII.1336.1

Pt260795

PtRbl11

AtRbl12

At1g18600

gw1.VI.85.1

Pt426413

PrRbl12

AtRbl13

At3g59520

grail3.0064008701

Pt679599

PtRbl13.1

  

eugene3.00070158

Pt562220

PtRbl13.2

AtRbl14

At3g17611

grail3.0102004101

Pt657794

PtRbl14

AtRbl15

At3g58460

estExt_fgenesh4_pm.C_LG_VI0468

Pt831984

PtRbl15