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Figure 3 | BMC Plant Biology

Figure 3

From: Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 β-glucosidase

Figure 3

Relationship between rice and other plant GH1 protein sequences described by a phylogenetic tree rooted by Os11bglu36. The sequences were aligned with ClustalX, then manually adjusted, followed by removal of N-terminal, C-terminal and large gap regions to build the data model. The tree was produced by the neighbor joining method and analyzed with 1000 bootstrap replicates. The internal branches supported by a maximum parsimony tree made from the same sequences are shown as bold lines. The sequences other than rice include: ME AAB71381, Manihot esculenta linamarase; RSMyr BAB17226, Raphanus sativus myrosinase; BJMyr AAG54074, Brassica juncea myrosinase; BN CAA57913, Brassica napus zeatin-O-glucoside-degrading β-glucosidase; HB AAO49267, Hevea brasiliensis rubber tree β-glucosidase; CS BAA11831, Costus speciosus furostanol glycoside 26-O-β-glucosidase (F26G); PS AAL39079Prunus serotina prunasin hydrolase isoform PH B precursor; PA AAA91166, Prunus avium ripening fruit β-glucosidase; TR CAA40057, Trifolium repens white clover linamarase; CA CAC08209, Cicer arietinum epicotyl β-glucosidase with expression modified by osmotic stress; DC AAF04007, Dalbergia cochinchinensis dalcochinin 8'-O-β-glucoside β-glucosidase; PT BAA78708, Polygonum tinctorium β-glucosidase; DL CAB38854, Digitalis lanata cardenolide 16-O-glucohydrolase; OE AAL93619, Olea europaea subsp. europaea β-glucosidase; CR AAF28800, Catharanthus roseus strictosidine β-glucosidase; RS AAF03675, Rauvolfia serpentina raucaffricine-O-β-D-glucosidase; CP AAG25897, Cucurbita pepo silverleaf whitefly-induced protein 3; AS CAA55196, Avena sativa β-glucosidase; SC AAG00614, Secale cereale β-glucosidase; ZM AAB03266, Zea mays cytokinin β-glucosidase; ZM AAD09850, Zea mays β-glucosidase; SB AAC49177, Sorghum bicolor dhurrinase; LE AAL37714, Lycopersicon esculentum β-mannosidase; HV AAA87339, barley BGQ60 β-glucosidase; HB AAP51059, Hevea brasiliensis latex cyanogenic β-glucosidase; PC AAC69619Pinus contorta coniferin β-glucosidase; GM AAL92115, Glycine max hydroxyisourate hydrolase; CS BAC78656, Camellia sinensis β-primeverosidase.

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