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Table 2 Predicted rice GH family 1 β-glucsidase protein properties and locations.

From: Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 β-glucosidase

Gene name

Gene ID

Pre-protein

Mature protein

  

MWa

AAb

Cleavage sitec

MWa

AAb

pIa

N-gly sited

Possible destinatione

Os1bglu1

AP003217 (BAD73293)

58.0

516

21–22

55.9

495

7.78

5

Out, per, ERm, ERl

Os1bglu2

AP003570

62.4

561

44–45

57.6

517

5.21

3

M inn, plas, chl, m int

Os1bglu3

AP003570

57.5

514

22–23

55.3

492

7.29

3

Out, per, ERm, ERl

Os1bglu4

AP003349 (BAD82183)

55.3

483

-

-

-

5.16

0

Per, cyt, m mat, ERm

Os1bglu5

AP003272 (BAD87322)

57.4

513

26–27

54.9

487

5.31

3

Out, per, ERm, ERl

Os3bglu6

AC146619

58.5

521

31–32

55.4

490

6.36

3

Out, per, ERm, ERl

Os3bglu7

AC091670

56.9

504

26–27

54.3

478

8.96

3

Out, per, ERm, ERl

Os3bglu8

AAAA02010831

63.1

568

33–34

59.7

535

6.21

3

Plas, per, ERm, ERl

Os4bglu9

AAAA02014146

58.3

514

28–29

55.6

486

7.73

4

Out, vac, per, ERm

Os4bglu10

AL731582 (CAE05481)

58.1

510

23–24

55.8

487

8.07

4

Out, vac, per, nuc

Os4bglu11

AL731582 (CAE05482)

59.8

530

25–26

57.4

505

7.29

4

Out, vac, per, nuc

Os4bglu12

AAAA02014151

57.5

510

24–25

55.3

486

8.85

6

Out, vac, per, ERm

Os4bglu13

AL731582 (CAE05485)

57.1

506

25–26

54.8

481

6.66

6

Out, vac, per, ERm

Os4bglu14

AL606622 (CAE03397)

58.8

516

23–24

56.4

493

7.69

6

Out, per, ERm, ERl

Os4bglu15

AL606622 (CAE003399)

-

-

-

-

-

-

-

-

Os4bglu16

AL606622 (CAE54544)

58.6

516

27–28

56.0

489

6.13

4

Out, per, ERm, ERl

Os4bglu17

AL606622

-

-

-

-

-

-

-

-

Os4bglu18

AL606659 (CAE54546)

57.6

505

26–27

55.0

479

5.3

1

Out, per, ERm, ERl

Os5bglu19

AC121366 (AAS79738)

59.8

530

31–32

56.2

499

5.05

6

Out, per, ERm, ERl

Os5bglu20

AAAA02016859

58.6

520

30–31

55.1

490

5.23

5

Out, per, ERm, ERl

Os5bglu21

AAAA02016862

59.2

526

34–35

55.3

492

5.67

4

Out, vac, per, ERm

Os5bglu22

AC137618 (AAV31358)

59.5

533

24–25

57.1

509

4.96

5

Out, vac, per, ERm

Os5bglu23

AAAA02016873

58.5

523

27–28

55.8

496

5.19

3

Out, vac, per, ERm

Os6bglu24

AP003543 (BAD61620)

57.8

504

18–19

55.8

486

7.78

5

Out, per, ERm, ERl

Os6bglu25

AP003766

57.2

501

19–20

55.2

482

5.51

2

Out, per, ERm, ERl

Os7bglu26

AP005182

58.5

510

27–28

55.6

483

6.49

6

M inn, per, plas, m int

Os8bglu27

AAAA02025912

56.8

499

19–20

54.8

480

8.36

5

Out, per, ERm, ERl

Os8bglu28

AP006049 (BAC57391)

56.6

500

24–25

53.9

476

8.4

6

M out, vac, out, per

Os9bglu29

AC108758

57.7

508

28–29

54.8

480

8.76

4

Out, per, ERm, ERl

Os9bglu30

AC108758

57.4

500

25–26

54.6

475

6.99

6

Out, vac, per, ERm

Os9bglu31

AC137594

58.4

523

22–23

56.3

501

5.32

2

Out, per, ERm, ERl

Os9bglu32

AAAA02027836

57.1

510

30–31

54.1

480

5.51

2

Out, per, vac, ERm

Os9bglu33

AC137594

56.8

503

30–31

53.8

473

5.62

2

Out, vac, per, ERm

Os10bglu34

AAAA02028915

58.0

510

26–27

55.3

484

6.34

5

Out, per, ERm, ERl

Os11bglu35

AC134047

-

-

-

-

-

-

-

-

Os11bglu36

AC135190

73.2

647

26–27

70.8

621

6.1

1

M inn, per, ERm, m int, chl

Os11bglu37

AAAA02030895

-

-

-

-

-

-

-

-

Os12bglu38

AL731785

57.0

492

21–22

54.8

471

7.44

5

Out, per, ERm, ERl

Osbglu39

AAAA02042985

53.0

458

-

-

-

5.91

 

Per, cyt, m mat, chl

Osbglu40

AAAA02048307

-

-

-

-

-

-

-

-

  1. a determined by ProtParam, b AA means number of amino acids, cpredicted by SignalP, dpredicted by NetNGlyc at the Expasy proteomics server [69], ecellular locations predicted by PSORT. Chl: chloroplast; cyt: cytoplasm; ERm: endoplasmic reticulum membrane; ERl: endoplasmic reticulum lumen; m inn, m int, m mat, m out: mitochondria inner membrane, intermembrane space, matrix, outer membrane, respectively; per: peroxisome; plas: plasma membrane; vac: vacuole.