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Table 1 Selected reference genes used for gene expression studies in Brachypodium

From: Exploring valid reference genes for gene expression studies in Brachypodium distachyonby real-time PCR

Gene symbol

Gene name

Brachypodium

Rice

Arabidopsis

ACT7

Actin 7

DV478555

LOC_Os10g36650

AT5G09810

EF1α

Elongation factor 1-alpha

DV482887

LOC_Os03g08050

AT5G60390

GAPDH

Glyceraldehyde-3-phosphate dehydrogenase

DV482924

LOC_Os08g03290

AT3G04120

RCA

Rubisco activase

DV482669

LOC_Os11g47970

AT2G39730

SamDC

S-adenosyl methionine decarboxylase

DV482676

LOC_Os04g42090

AT3G25570

TUA6

Tubulin alpha-6

DV478602

LOC_Os11g14220

AT4G14960

UBC18

Ubiquitin-conjugating enzyme 18

DV481689

LOC_Os12g44000

AT5G42990

Ubi4

Polyubiquitin (Ubi4)

DV482834

LOC_Os04g53620

AT5G20620

Ubi10

Polyubiquitin (Ubi10)

DV484269

LOC_Os06g46770

AT4G05320

  1. The Brachypodium gene accession numbers refer to the dbEST division of GenBank [25]. The Arabidopsis Genome Initiative (AGI) codes and the TIGR rice genome locus identifiers of the gene homologues are also listed.