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Table 6 Abundant gene families detected in the dataset

From: Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines

Gene family

Subfamily

Expression abundance

Unigene ID

   

93-11

PA64s

LYP9

Total

 

P450a

Cytochrome P450 Monooxygenase

1111

348

1280

2739

Unigene_0001

HSPb

LMW

Hsp16.9

29

102

79

210

Unigene_0010

  

Hsp17.4

28

74

101

203

Unigene_0012

  

Hsp22

3

3

13

19

Unigene_0141

  

Hsp26

4

6

40

50

Unigene_0055

 

Classical HSP protein

Hsp40

29

45

29

103

Unigene_0031

  

Hsp70

71

50

88

209

Unigene_0011

  

Hsp90

44

34

32

110

Unigene_0027

  

Hsp101

1

4

11

16

Unigene_0170

LEAc

LEA

LEA3

90

61

98

249

Unigene_0007

  

LEA D-34

80

16

75

171

Unigene_0014

  

LEA

21

7

27

55

Unigene_0052

  

LEA

8

17

13

38

Unigene_0072

  

LEA

12

3

19

34

Unigene_0081

 

Seed maturation protein

PM

61

19

56

136

Unigene_0023

  

PM24

8

6

9

23

Unigene_0123

  

PM

4

2

11

17

Unigene_0151

  

PM

4

4

7

15

Unigene_0180

  

PM

3

5

4

12

Unigene_0228

  

PM

3

1

0

4

Unigene_0848

  

PM23

1

1

1

3

Unigene_0999

  

PM36

2

1

0

3

Unigene_1204

RABd

RAB21

 

85

52

101

238

Unigene_0008

 

RAB24

 

64

29

68

161

Unigene_0017

 

RAB16

RAB16b

46

27

66

139

Unigene_0021

  

RAB16c

27

11

26

64

Unigene_0047

  

RAB16d

1

4

6

11

Unigene_0247

 

RAB25

 

45

13

52

110

Unigene_0028

  1. aCytochrome P450 family, bheat shock protein, clate embryogenesis abundant protein, and d RAB protein.