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Figure 1 | BMC Plant Biology

Figure 1

From: Arabidopsis At5g39790 encodes a chloroplast-localized, carbohydrate-binding, coiled-coil domain-containing putative scaffold protein

Figure 1

Multiple sequence alignment of At5g39790 and homologues. Homologue sequences were collected by database searching using the sequence of At5g39790 as the query, as detailed in Methods. A multiple sequence alignment was constructed from sub-alignments, and refined, as detailed in Methods. Species representation and the clones used to generate the sequences are as follows: At5g39790 (AY045645); Hciliaris (Helianthus ciliaris EL428795.1); Rraphanist (Raphanus raphanistrum EV525590 + EV529819); Gmax (Glycine max EH258682 + EH259354); Ptrichocar (Populus trichocarpa EF146538.1); Cclementin (Citrus clementina DY276384.1); Csinensis (Citrus sinensis CK933812 + CX302233); Toficinale (Taraxacum oficinale DY832182.1); Osativa (Oryza sativa CT832199.1); Hvulgare (Hordeum vulgare AK252768.1); Graimondii (Gossypium raimondii C0080363.1); Mtruncatul (Medicago truncatula DW015918.1 + BF003903); Pglauca (Picea glauca EX436035.1 + EX360120); Ptaeda (Pinus taeda DN462837.1 + CO362594.1); Creinhardt (Chlamydomonas reinhardtii XM_001694367.1). Structural domains were defined as detailed in Methods. Both the strongly predicted coiled-coil (CC) domain and the carbohydrate-binding domain (CBM) are indicated by underlined bars.

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