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Table 2 Summary of EST sequencing

From: Oil palm (Elaeis guineensisJacq.) tissue culture ESTs: Identifying genes associated with callogenesis and embryogenesis

 

EC

NEC

EMB

All

 

No.

%

No.

%

No.

%

No.

%

Total clones sequenced

3,472

 

7,825

 

9,652

 

20,949

 

Clean ESTs for assembly

2,716

 

6,501

 

8,382

 

17,599

 

Average EST length (base)

348

 

493

 

482

 

465

 

No. of consensi

396

 

1207

 

1391

 

3,268

 

No. ESTs within consensus

990

36

3,988

61

4,371

52

11,283

64

No. of singletons

1,726

64

2,513

39

4,011

48

6,316

36

Unique sequencesa

2,122

78

3,720

57

5,402

64

9,584

54

  1. aCalculated as the sum of the number of consensi and singletons within a library.
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BMC Plant Biology

ISSN: 1471-2229

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