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Table 2 Integration of physical and genetic maps.

From: A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance

Linkage group

No. of contigs

Coverage (kbp)

Average contig size (kbp)

1

20

14,895

745

2

14

9,752

696

3

13

5,600

431

4

15

12,289

820

5

19

9,348

492

6

18

10,318

573

7

19

12,065

635

8

20

11,714

585

9

17

11,309

664

10

19

12,199

642

11

16

9,579

598

12

24

14,678

612

13

35

18,337

524

14

27

16,804

623

15

14

7,820

558

16

13

7,522

579

17

16

10,841

678

18

29

19,612

675

19

19

8,664

455

Unknown*

28

32,141

1,147

No. of anchored contigs

395

255,476

647

No. of non anchored contigs

1,375

460,208

334

Total

1,770

715,684

405

  1. The markers used for integration consisted of 344 microsatellites from the reference map of [37], 45 microsatellites present in other genetic maps, newly developed markers from contigs that carried genes relevant to this study, and 23 SSCP markers for NBS-LRR genes [34]. The physical length of the contigs was estimated based on an average band size of 1.1 kbp.
  2. * Not assigned to a linkage group because two or more markers placed on the physical contig mapped to two or more linkage groups.