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Table 4 Cell-wall-related genes involved in transport and detoxification processes differentially expressed in F2, F2bm3 and AS225 basal and ear internodes at silking stage.

From: Expression of cell wall related genes in basal and ear internodes of silking brown-midrib-3, caffeic acid O-methyltransferase (COMT) down-regulated, and normal maize plants

 

Contig

mRNA

Basal internode

Ear internode

Transport and detoxification process genes

  

F2

F2bm3/F2

AS225/F2

F2

F2bm 3/F2

AS225/F2

ABC transporter

3024030.2.1

DT653269

18994

2.35

1.81

13193

3.38

2.11

Glutathione S-transferase II (ZmGST17. Bronze2 like)

3829517.2.1

AF244682

36756

2.43

1.74

16243

4.91

2.50

Glutathione S-transferase III (ZmGST22. Bronze2 like)

2441327.2.1

AF244687

19055

1.75

2.32

20836

2.76

2.61

UDP-glucosyltransferase like

3748389.2.1

CG357903

83751

2.23

1.96

64132

2.80

1.91

MtN21 Nodulin-like protein

3203235.2.1

CO529888

18082

2.21

1.89

11373

3.24

2.31

  1. Normalized expression values are given for the F2 line and values for each mutant are expressed as ratios of signal intensity compared to normal plants. Genes were considered to be significantly differentially expressed when expression ratio values were lower than 0.5 or higher than 2.0. Values between the two thresholds are indicated in italics.