Figure 3
Higher-order structure in the coexpression network. All regulons containing at least 20 genes are depicted; these comprise a total of 9,436 genes. Regulons are represented by ovals numbered 1 through 69. A linkage between two clusters means that one or more genes in one of the clusters are correlated with one or more genes in the other cluster. As observed from the proximity of regulons with similar broader functional category, three super-clusters of regulons are revealed: regulons related to information-related functions (purple), plastidic functions (green) and defense response-related functions (yellow). The predominant functionality of each regulon is defined in Table 1. Network was visualized using the GraphExplore tool [118].