From: Identification of flowering genes in strawberry, a perennial SD plant
Gene | AT gene locus | Biological function | Act./Repr. +/- | Reference | Fragaria | E-value |
---|---|---|---|---|---|---|
FLC | AT5G10140 | MADS-box TF | - | [13] | nf | Â |
MAF1/FLM | AT1G77080 | MADS-box TF | - | [50] | nf | Â |
Fri complex | ||||||
FRI | AT4G00650 | Unknown, enhancer of FLC | - | [14] | nf | Â |
FRL1 | AT5G16320 | Unknown, enhancer of FLC | - | [15] | EX686406 | 4E-45 |
FRL2 | AT1G31814 | Unknown, enhancer of FLC | - | [15] | Contig 4768 | 6E-49 |
FES1 | AT2G33835 | CCCH zinc finger protein | - | [53] | nf | Â |
SUF4 | AT1G30970 | putative zinc finger containing TF | - | [53] | BAR-003-F06 | 5E-46 |
Swr complex | ||||||
PIE | AT3G12810 | ATP-dependent chromatin-remodelling factor | - | [16] | nf | Â |
SEF1/SWC6 | AT5G37055 | Component of chromatin remodelling complex | - | [52] | DY670674 | 4E-70 |
ARP6/ESD1 | AT3G33520 | Component of chromatin remodelling complex | - | [52] | nf | Â |
ATX1 | AT2G31650 | Putative SET domain protein | - | [90] | EX687477 | 4E-71 |
Paf1 complex | ||||||
ELF7 | AT1G79730 | RNA polymerase 2 associated factor 1 -like | - | [17] | nf | Â |
ELF8 | AT2G06210 | RNA polymerase 2 associated factor -like | - | [17] | BAR-008-H08 | 3E-42 |
VIP4 | AT5G61150 | RNA polymerase 2 associated factor -like | - | [91] | EX660943 | 2E-50 |
VIP3 | AT4G29830 | RNA polymerase 2 associated factor -like | - | [18] | EX675781 | 7E-98 |
EFS/SDG8 | AT1G77300 | putative histone H3 methyltransferase | - | [53] | nf | Â |
VRN2-PRC2 complex | ||||||
VRN2 | AT4G16845 | Polycomb group zinc finger | + | [92] | nf | Â |
CLF | AT2G23380 | Polycomb group protein | + | [93] | nf | Â |
SWN1/EZA | AT4G02020 | Polycomb group protein | + | [93] | EX687655 | 3E-114 |
FIE | AT3G20740 | Polycomb group protein | + | [93] | DY671601 | 1E-112 |
VIN3 | AT5G57380 | PHD domain protein | + | [20] | CO816801 | 2E-58 |
LHP1 | AT5G17690 | epigenetic silencing | + | [56] | DY669633 | 2E-40 |
VRN1 | AT3G18990 | DNA binding protein | + | [55] | DY670727 | 8E-43 |