From: SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes
Source | # ESTs | EST length | # mRNA | # mRNA length | # Cluster | # TCs | TC length | # ESTs in TCs | # sESTs | SEST length | # Unique transcripts |
---|---|---|---|---|---|---|---|---|---|---|---|
SOLLC | 259990 | 522.47 ± 156.39 | 5770 | 1377.23 ± 735.42 | 17001 | 20548 | 1019.43 ± 544.69 | 234297 | 30937 | 491.07 ± 246.90 | 51485 |
SOLPN | 8346 | 460.38 ± 129.80 | 13 | 1854 ± 974.32 | 817 | 844 | 666.91 ± 265.85 | 5249 | 3110 | 470.86 ± 165.38 | 3954 |
SOLHA | 8000 | 617.39 ± 165.42 | 30 | 864.07 ± 537.43 | 1119 | 1243 | 900.79 ± 342.79 | 5323 | 2707 | 561.14 ± 171.26 | 3950 |
SOLLP | 1008 | 352.89 ± 133.45 | - | - | 103 | 109 | 478.06 ± 151.54 | 413 | 594 | 342.03 ± 136.70 | 703 |
RNA | 231275 | 611.41 ± 205.52 | 1704 | 1144.24 ± 663.38 | 18590 | 23453 | 983.56 ± 429.02 | 184233 | 48630 | 627.26 ± 236.38 | 72083 |
SOLCH | 7752 | 812.65 ± 152.46 | 60 | 1008.97 ± 533.89 | 632 | 637 | 845.18 ± 266.09 | 1513 | 6279 | 824.93 ± 154.44 | 6916 |
TOBAC | 240440 | 601.54 ± 231.81 | 3605 | 795.75 ± 805.60 | 24274 | 28571 | 934.99 ± 423.1 | 158264 | 81247 | 565.44 ± 262.19 | 109818 |
NICBE | 42566 | 611.86 ± 243.81 | 301 | 1260.82 ± 1379.73 | 4452 | 5006 | 984.41 ± 443.85 | 29051 | 13784 | 505.82 ± 299.38 | 18790 |
NICSY | 8583 | 381.48 ± 168.21 | 94 | 1577.17 ± 1125.60 | 662 | 674 | 457.99 ± 437.09 | 1838 | 6831 | 400.25 ± 209.85 | 7505 |
NICAT | 329 | 303.60 ± 152.31 | 94 | 1239.71 ± 726.51 | 32 | 32 | 949.5 ± 775.84 | 68 | 352 | 461.88 ± 463.58 | 384 |
NICLS | 12448 | 492.11 ± 205.98 | 95 | 831.58 ± 456.42 | 1268 | 1379 | 651.89 ± 252.34 | 7570 | 4969 | 467.14 ± 215.44 | 6348 |
CAPAN | 33311 | 466.73 ± 154.98 | 564 | 974.95 ± 587.75 | 4082 | 4293 | 760.45 ± 331.46 | 22144 | 11714 | 460.65 ± 194.94 | 16007 |
CAPCH | 372 | 464.35 ± 228.64 | 105 | 1072.8 ± 642.35 | 32 | 34 | 901.97 ± 490.54 | 86 | 389 | 572.65 ± 446.71 | 423 |
PETHY | 14017 | 500.50 ± 185.75 | 323 | 1254.12 ± 724.09 | 1627 | 1738 | 704.4 ± 308.88 | 6642 | 7612 | 520.40 ± 268.87 | 9350 |
COFCA | 55694 | 613.87 ± 174.08 | 100 | 1158.32 ± 643.76 | 6141 | 6620 | 863.97 ± 325.59 | 42873 | 12732 | 548.20 ± 181 | 19352 |
COFAR | 1577 | 413.29 ± 149.78 | 150 | 725.25 ± 534.10 | 129 | 137 | 644.16 ± 333.3 | 455 | 1271 | 421.38 ± 207.41 | 1408 |
 | 925708 |  | 13008 |  | 80961 | 925708 |  | 700019 | 233158 |  | 328476 |