Table 1 List of identified genes in the C. canephora BAC 46C02.

46C02_g1 ^pb

Putative protein

pfam01843, DIL, DIL domain

NM_001064205 O. sativa (1e-148)

CAO70643 unnamed protein product V. vinifera (3e-119)

AJ796769 A. majus (0.0)

46C02_g2

Expressed Protein

pfam05764, YL1 nuclear protein

NM_129229 A. thaliana (5e-80)

NP_181212 DNA binding A. thaliana (1e-90)

DV701332 C. canephora (0.0; 99% id.)

46C02_g3 ^a

Putative protein

pfam02791, DDT domain

NM_117344 A. thaliana (9e-83)

CAO47883 V. vinifera (0.0)

DY269367 C. clementina (9e-133)

46C02_g4

Expressed protein

/

EF147735 P. trichocarpa (2e-52)

ABL97988 putative c-myc B. rapa (4e-35)

DV692405 C. canephora (2e-167; 100% id.)

46C02_g5

Expressed protein

pfam03479, DUF296, Domain of unknown function

AJ132349 A. majus (3e-96)

CAO65023 unnamed protein product V. vinifera (4e-65)

DV692183 C. canephora (0.0; 97% id.)

46C02_g6 ^c

CcEIN4

cd00156, REC, Signal receiver domain

AF118844 L. esculentum (0.0)

AF118844 ethylene receptor L. esculentum (0.0)

CK272769 S. tuberosum (0.0)

46C02_g7 ^a

Expressed protein

pfam08242, Methyltransferase domain

BT014095 L. esculentum (8e-64)

CAO65026 unnamed protein product V. vinifera (2e-113)

DV685577 C. canephora (0.0; 99% id.)

46C02_g8 ^a

Putative protein

pfam03479, DUF296, Domain of unknown function

AM463589 V. vinifera (3E-158)

CAO65027 unnamed protein product V. vinifera (8e-83)

EB084622 C. annuum (3e-150)

46C02_g9 ^a

Putative protein

/

NM_111327 A. thaliana (7e-123)

CAO65029 unnamed protein product V. vinifera (5e-122)

BI925858 S. lycopersicum (3e-114)

46C02_g10 ^a

Putative protein

cd01926, cyclophilin_ABH_like

AK246441 S. lycopersicum (2E-112)

CAN61038 hypothetical protein V. vinifera (7e-70)

N980378 S. chacoense (1e-114)

46C02_g11 ^a

Putative protein

/

AM448871 V. vinifera (5E-75)

CAO65032 unnamed protein product V. vinifera (1e-112)

CK272594 S. tuberosum (2e-79)

46C02_g12 ^b

CcERF1

smart00380, AP2 DNA-binding domain

AM441538 V. vinifera (7E-38)

CAO65033 unnamed protein product V. vinifera (3e-53)

CV262586 P. trichocarpa (3e-36)

46C02_g13 ^a

Putative protein

pfam00082, Peptidase_S8; cd02120, subtilisin_like

AP009276 S. lycopersicum (8e-170)

CAA06414 P69F protein S. lycopersicum (0.0)

CK269227 S. tuberosum (5e-108)

46C02_g14

Expressed protein

smart00156, PP2Ac, Protein phosphatase 2A

AJ002485 M. sativa (0.0)

BAF31132 subunit of protein phosphatase 1 V. faba (2e-168)

DV705485 C. canephora (0.0; 100% id.)

46C02_g15

Expressed protein

cd00180, Serine/Threonine protein kinase

AF453448 S. tuberosum (1e-161)

AF203481 carboxylase kinase L. esculentum (2e-126)

DV693205 C. canephora (0.0; 99% id.)

46C02_g16

Expressed protein

pfam01501, Glycosyl transferase family 8

BT013608 L. esculentum (0.0)

CAO65058 unnamed protein product V. vinifera (0.0)

DV705148 C. canephora (0.0; 99% id.)

46C02_g17 ^b

Putative protein

pfam00067, Cytochrome P450

CU104691 S. lycopersicum (2e-30)

CAO66223 unnamed protein product V. vinifera (2e-109)

CF513973 V. vinifera (1e-37)

46C02_g18

Putative protein

pfam07859, Abhydrolase_3

AC209222.1 P. trichocarpa (1e-23)

CAO47785 unnamed protein product V. vinifera (1e-46)

DV677672 C. canephora (8e-94; 80% id.)

46C02_g19

Putative protein

cd00167 DNA-binding domains

EU181424 V. vinifera (6e-84)

AAB41101 transcription factor Myb1 N. tabacum (7e-60)

FC069164 V. vinifera (5e-84)

46C02_g20 ^b

Putative protein

Pfam00190, Cupin_1

X82463 M. salicifolia (9e-27)

CAA57846 M. salicifolia (4e-82)

EE986213 N. nucifera (1e-23)

46C02_g21

tRNA Arg

/

CU104691 S. lycopersicum (9e-29)

/

EX530859 M. truncatula (5e-25)