Table 2 Identified transcriptional regulators and DNA-binding proteins.
A | Â | Â | Â | Â | Â | Â |
|---|---|---|---|---|---|---|
Clust | Gene | Gene Symbol | Description | WT E vs ANT E | WT E vs INO E | WT F vs INO F |
(2) | At5g57390 | AIL5 | AP2/EREBP, ANT-like (organ size control, inflorescence) | -2.17 | -1.33 | -1.36 |
(3) | At1g79700 | --- | AP2/EREBP, AP2-like | -2.38 | -1.37 | -2.29 |
(5) | At2g46530 | ARF11 | auxin-responsive factor | -2.18 | -1.19 | 1.05 |
(10) | At2g33860 | ETT | auxin-responsive factor (flower development) | -2.37 | 1.03 | 1.07 |
(4) | At1g26680 | --- | B3 REM family | -2.86 | -1.15 | -1.10 |
(10) | At5g18090 | --- | B3 REM family | -2.06 | -1.11 | 1.16 |
(7) | At3g46770 | --- | B3 REM family | -1.54 | -1.26 | -1.44 |
(11) | At3g61970 | NGA2 | B3 NGATHA family (lateral organ development, gynoecium) | -2.24 | -1.04 | -1.42 |
(7) | At2g20180 | PIL5 | bHLH family (light responsive GA synthesis repressor) | -3.13 | -1.42 | -2.00 |
(3) | At4g37610 | BT5 | BTB/POZ and TAZ zinc finger | -4.91 | -1.37 | -2.40 |
(0) | At3g48360 | BT2 | BTB/POZ and TAZ zinc finger (telomerase activation) | -4.78 | -1.26 | -2.59 |
(8) | At1g68640 | PAN | bZIP family (floral organ nmber) | -2.16 | -1.17 | 1.31 |
(2) | At3g55560 | AGF2 | DNA-binding At-hook family | -2.69 | -1.16 | -1.54 |
(10) | At4g24150 | ATGRF8 | growth-regulating factor family | -2.70 | -1.10 | -1.13 |
(9) | At1g76110 | --- | HMG1/2, ARID/BRIGHT DNA-binding domain | -3.01 | -1.20 | -1.14 |
(4) | At1g04880 | --- | HMG1/2, ARID/BRIGHT DNA-binding domain | -2.35 | 1.07 | 1.06 |
(7) | At4g36740 | ATHB40 | homeobox-leucine zipper Class I family | -3.80 | -1.89 | -4.73 |
(11) | At1g75430 | --- | homeodomain protein | -2.02 | 1.03 | 1.04 |
(10) | At5g41410 | BEL1 | homeodomain protein (ovule development) | -2.66 | -1.12 | -1.11 |
(7) | At5g17300 | --- | myb family | -2.01 | -1.21 | -1.91 |
(3) | At4g37260 | MYB73 | myb R2R3 family | -1.86 | -1.03 | -1.58 |
(0) | At5g51910 | --- | TCP family | -1.52 | -1.16 | -1.42 |
(11) | At2g01500 | PFS2 | WUS type homeobox (ovule development) | -2.17 | -1.50 | -1.59 |
(8) | At1g69180 | CRC | YABBY family (abaxial cell development) | -2.19 | 1.02 | -1.18 |
(7) | At2g36320 | --- | zinc finger (AN1-like) family | -1.51 | -1.06 | -1.37 |
(7) | At5g57660 | --- | zinc finger (B-box type) family | -1.76 | -1.13 | -1.66 |
(3) | At2g25900 | --- | zinc finger (CCCH-type) family | -2.23 | -1.07 | -1.79 |
(7) | At5g61120 | --- | zinc finger (PHD type) family | -2.02 | -1.23 | -1.18 |
B | Â | Â | Â | Â | Â | Â |
Early | At5g61590 | --- | AP2/EREBP, ERF subfamily B-3 | -1.85 | -1.63 | -2.48 |
Full | At2g18050 | HIS1-3 | histone H1-3 (drought stress inducible) | -1.89 | -1.34 | -4.50 |
Full | At2g18550 | ATHB21 | homeobox-leucine zipper Class I | -2.13 | -1.41 | -3.66 |
Full | At5g03790 | ATHB51/LMI1 | homeobox-leucine zipper Class I (LFY target, meristem identity) | 1.58 | -2.23 | -6.65 |
Early | At3g54340 | AP3 | MADS-box protein (floral development) | -1.82 | -2.38 | -6.38 |
Full | At5g01840 | AtOFP2 | ovate family, interacts with BLH4 (transcriptional repressor) | -1.14 | -1.13 | -2.34 |
Early | At2g40750 | WRKY54 | WRKY family transcription factor (defense response) | -1.59 | -2.10 | -1.58 |
Early | At5g06070 | RBE | zinc finger (SUP-like C2H2 type) family | -2.30 | -2.01 | -1.98 |
C | Â | Â | Â | Â | Â | Â |
| Â | At5g18000 | REM18 | B3 family, reproductive meristem (regulated by STK/SHP1/2) | -3.37 | -1.51 | -1.44 |
| Â | At5g42630 | ATS/KAN4 | GARP family transcription factor (integument development) | -7.13 | -2.00 | -1.31 |
| Â | At3g56400 | WRKY70 | WRKY transcription factor (plant senescence, defense) | -2.66 | -1.74 | -2.05 |
| Â | At1g23420 | INO | YABBY transcription factor (integument development) | -10.33 | -4.04 | -9.14 |
| Â | At1g68190 | --- | zinc finger (B-box type) transcription factor | -2.28 | -1.67 | -2.03 |
| Â | At3g23130 | SUP | zinc finger (C2H2 type) (floral development) | -2.03 | -1.40 | -1.55 |