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Table 1 Distribution of the ESTs according to the genus giving the best hit (E-value ≤ e-20)

From: Generation of Phaseolus vulgaris ESTs and investigation of their regulation upon Uromyces appendiculatus infection

 

Unisequence

singleton

contig = 2

contig>2

vector

13

2

7

4

No hit

118

49

66

3

Low hit (>e-20)

1279

514

663

102

Fungi

360

62

210

88

Barley

1

1

0

0

Ice plant

1

0

1

0

Petunia

1

1

0

0

S. pombe

1

0

1

0

Sugarcane

1

1

0

0

Sunflower

1

0

1

0

Beet

2

1

0

1

N. benthamiana

2

1

1

0

Oilseed rape

2

0

0

2

Tobacco

2

1

1

0

Pinus

3

3

0

0

Potato

3

2

1

0

Letuce

4

2

2

0

Wheat

5

2

0

3

Aquilegia

6

3

2

1

Rice

6

5

0

1

Tomato

7

0

5

2

A. thaliana

9

4

3

2

Poplar

15

6

5

4

Grape

18

6

9

3

Cotton

23

8

13

2

Lotus

145

51

52

42

M. truncatula

500

190

184

126

Common bean

3473

622

1249

1602

Soybean

4580

1184

1844

1552

Total

10581

2721

4320

3540

  1. "Unisequence", "singleton", "contig = 2", and "contig>2" columns represent the number of total unisequences, those found once in the SSH library, the contigs made up of only 2 sequences and the contigs composed of more than 2 sequences, respectively, having a hit with an organism listed in column one.