Table 2 List of 61 UGMS markers identified in a total of 60 unigenes showing the motif of the repeats unit and annotation of the unigenes as defined by best match Arabidopsis protein
Unigene ID | UGMS markers | Repeat motif | Arabidopsis Proteome hit |
|---|---|---|---|
TUG1 | TUGMS1 | (TA)13 | No hit |
TUG3 | TUGMS3 | (TC)10 | At5g25360-expressed protein; 1e-29 |
TUG4 | TUGMS4 | (TC)11(CA)11 | At5g59320-Lipid transfer protein; 6e-24 |
TUG7 | TUGMS7 | (GA)19 | No hit |
TUG11 | TUGMS11 | (GA)22 | At1g51650-Hydrogen ion transporting ATP synthase activity; 4e-31 |
TUG12 | TUGMS12 | (TA)22 | At1g06680-calcium ion binding; 1e-20 |
TUG13 | TUGMS13 | (TG)32(TC)24 | At5g26740-molecular function unknown; 1e-24 |
TUG15 | TUGMS15 | (GA)14 | At5g10390-DNA binding; 1e-60 |
TUG17 | TUGMS17 | (TC)25 | At3g22110-Ubiquitin-dependent protein; 5e-34 |
TUG18 | TUGMS18 | (GA)10 | At4g05320-protein modification; 8e-39 |
TUG20 | TUGMS20 | (TC)24 | At5g23860-Tubulin beta 8 chain; 2e-84 |
TUG22 | TUGMS22 | (GA)13 | At2g14900-Gibberellin-regulated protein; 1e-05 |
TUG23 | TUGMS23 | (TC)13 | At4g32130-UPF0480 family; 7e-42 |
TUG24 | TUGMS24 | (TC)11 | At5g10390-histone H3 protein; 7e-40 |
TUG27 | TUGMS27 | (GA)20 | At1g05010-1-amino cyclopropane-1-carboxylate oxidase; 7e-41 |
TUG28 | TUGMS28 | (TG)12(GA)13 | At4g00165-lipid transport protein; 1e-30 |
TUG29 | TUGMS29 | (TC)20 | At4g14420-Elicitor protein; 8e-10 |
TUG31 | TUGMS31B | (TC)9 | At1g33140-60S ribosomal protein; 8e-49 |
TUG33 | TUGMS33 | (GA)10 | No hit |
TUG34 | TUGMS34 | (TTC)18(GA)10 | At4g25890-60S acidic ribosomal protein P3-1; 4e-13 |
TUG35 | TUGMS35 | (TC)11 | At2g44650-Cholorplast chaperonin 10;; 3e-46 |
TUG36 | TUGMS36 | (GA)13 | No hit |
TUG41 | TUGMS41 | (GA)11 | No hit |
TUG42 | TUGMS42 | (GA)23(GA)11 | No hit |
TUG43 | TUGMS43A | (GA)11 | At2g18020-60S ribosomal protein; e-129 |
TUG44 | TUGMS44 | (GA)12 | No hit |
TUG45 | TUGMS45 | (GA)20 | No hit |
TUG46 | TUGMS46 | (TC)13 | At4g10480-Alpha NAC putative; 1e-31 |
TUG48 | TUGMS48 | (GA)14 | At1g19150-PSI type II chlorophyll a/b-binding protein, putative; 1e-10 |
TUG50 | TUGMS50 | (TC)11 | At2g38140-30S ribosomal protein S31 choloroplast; 2e-07 |
TUG51 | TUGMS51 | (GA)11 | At4g24820-26S proteosome non-ATPase regulatory subunit 6 probable; 3e-59 |
TUG52 | TUGMS52 | (GA)14 | No hit |
TUG58 | TUGMS58A | (TCC)14 | No hit |
| Â | TUGMS58B | (TCG)28 | Â |
TUG59 | TUGMS59 | (TGG)9 | At3g49050-Calmodulin binding heat shock protein.; 2e-31 |
TUG63 | TUGMS63 | (CCG)6 | At4g13940-Adenosylhomocysteinase 4e-29 |
TUG64 | TUGMS64 | (CAG)9 | At3g26650-Glyceraldehyde-3-phosphate dehydrogenase A choloroplast precursor; 5e-38 |
TUG66 | TUGMS66 | (TTA)8 | At5g03455-Dual specificity phosphatase cdc 25; 3e-17 |
TUG70 | TUGMS70 | (CAA)15 | At4g34530-bHLH transcription factor; 3e-17 |
TUG71 | TUGMS71 | (GAA)8 | At5g21430-DnaJ domain family; 5e-43 |
TUG72 | TUGMS72 | (ATG)10 | At5g57660-Zinc finger protein; 7e-23 |
TUG73 | TUGMS73 | (TAA)12 | No hit |
TUG74 | TUGMS74 | (CCA)9 | No hit |
TUG75 | TUGMS75 | (ATG)9 | No hit |
TUG76 | TUGMS76 | (GAA)10 | No hit |
TUG77 | TUGMS77 | (CAA)10 | No hit |
TUG78 | TUGMS78 | (TCC)13 | No hit |
TUG79 | TUGMS79 | (CCA)11 | At2g35960-hairpin induced protein putative; 1e-27 |
TUG82 | TUGMS82 | (CAT)8 | At28750-Photosystem I subunit putative; 8e-09 |
TUG83 | TUGMS83 | (TGG)9 | At4g13850-Glycine rich RNA binding protein 6e-34 |
TUG84 | TUGMS84 | (ATG)34 | No hit |
TUG85 | TUGMS85 | (GAA)11 | No hit |
TUG87 | TUGMS87 | (GAA)6 | No hit |
TUG90 | TUGMS90 | (TTTG)6 | No hit |
TUG92 | TUGMS92 | (TTTC)13 | At1g49410-mitochondrial import receptor subunit TOM6 homolog; 2e-08 |
TUG95 | TUGMS95 | (CAAA)6 | No hit |
TUG98 | TUGMS98 | (TTGTG)8 | No hit |
TUG99 | TUGMS99 | (GGGAGA)7(GAGAA)6 | At5g01650-light inducible protein; 1e-49 |
TUG102 | TUGMS102A | (GGAAA)12(GA)11 | No hit |
TUG105 | TUGMS105 | (TTCTC)5 | No hit |
TUG108 | TUGMS108 | (CAAAAA)6 | At1909310-expressed; 7e-11 |