Table 1 Unigenes, SNPs, and SNP rates
From: Sequence diversity in three tomato species: SNPs, markers, and molecular evolution
Analysis | LxP | LxH | L | ||||||
|---|---|---|---|---|---|---|---|---|---|
CDS | UTR | NA | CDS | UTR | NA | CDS | UTR | NA | |
Unigenes analyzed | 2249 | 2463 | 19159 | ||||||
Kb analyzed | 504.9 | 116.8 | 21.5 | 860.1 | 203.6 | 29.7 | 8446.3 | 1962.1 | 649.6 |
3728/ | 1104/ | 8457/ | 3501/ | 349/ | 14455/ | 8229/ | 919/ | ||
SNPs/indels | 206 | 534 | 92/30 | 614 | 1611 | 64 | 1980 | 3006 | 221 |
Unigenes with SNPs | 1341 | 1934 | 5084 | ||||||
SNP rate | 0.8852 | 1.3349 | 0.2605 | ||||||
SNP rate per region | 0.779 | 1.4025 | 0.5682 | 1.0546 | 2.5107 | 1.3925 | 0.1946 | 0.5726 | 0.1755 |