Table 1 Comparison of miRNA expression using MiRCURY array and TaqMan miRNA assay
From: Profiling microRNA expression in Arabidopsis pollen using microRNA array and real-time PCR
|  | MiRCURY Array£ | Taqman MiRNA Assay¥ |  |  |  | |||||
|---|---|---|---|---|---|---|---|---|---|---|
|  | log2(sample/pool) | MP CT | Inf CT |  | AS | Slotkin et. al€ | ||||
Name | Inf 1 | Inf 2 | MP1 | MP2 | mean | mean | ΔΔCT | RP§ | Inf | MP |
156a-f | -0.44 | 0.27 | 0.23 | 0.19 | 29.85 | 29.77 | -0.9 | 2 | 2591 | 51961 |
156g | -0.33 | 0.34 | 0.16 | 0.09 | 35.08 | 34 | 0.09* | 0 | 131 | 678 |
156h | Â | Â | Â | Â | 35.49 | 31.6 | 2.89 | 0 | 1525 | 611 |
157a-d | -0.32 | 0.92 | -1.35 | -1.04 | 34.42 | 31.18 | 2.26 | 1 | 1792 | 671 |
158a | 0.07 | 0.77 | -2.21 | -2.12 | 32.87 | 27.9 | 3.95 | 8 | 16305 | 2307 |
158b | 0.15 | 0.79 | -1.82 | -1.82 | 32.89 | 30.5 | 1.39 | 0 | 13757 | 2037 |
159a | -0.33 | 1.03 | -3.17 | -3.04 | NA | 25.2 | Â | 67 | 197957 | 5540 |
159b | -0.31 | 1.04 | -3.31 | -3.01 | NA | 24.3 | Â | 10 | 189644 | 5319 |
159c | -0.17 | 1.07 | -2.87 | -2.84 | 35.85 | 29.7 | 4.49 | 0 | 35850 | 1247 |
160a-c | -0.04 | 0.39 | -0.31 | -0.39 | 30.71 | 28.95 | 0.74 | 17 | 833 | 351 |
161 | -0.03 | 1.04 | -1.29 | -1.36 | 33.65 | 29.7 | 2.91 | 71 | 8245 | 4737 |
162a,b | 0.05 | 0.73 | -1.13 | -1.2 | 35.35 | 28.9 | 5.82 | 7 | 123 | 35 |
163 | 0.39 | 0.51 | -3.27 | -2.83 | 36.98 | 30.5 | 5.29 | 3 | 5665 | 126 |
164a,b | NA | NA | NA | NA | 36.39 | 25.6 | 8.53 | 21 | 10771 | 382 |
164c | NA | NA | NA | NA | 37.04 | 26.1 | 10.03 | 1 | 10005 | 349 |
165a,b | 0.31 | 0.58 | 0 | 0.06 | Â | Â | Â | 1 | 1 | 15 |
166a-g | -0.24 | 1.11 | -3.04 | -3.25 | 31.93 | 24.9 | 6.4 | 6 | 472 | 33 |
167a,b | -0.64 | 0.96 | -2.4 | -2.29 | 35.95 | 25.6 | 9.48 | 218 | 33681 | 1154 |
167c | -0.34 | 0.94 | -1.41 | -1.55 | NA | 26.1 | Â | 1 | 250 | 14 |
167d | -0.09 | 0.85 | -0.76 | -0.96 | NA | 34 | Â | 4 | 852 | 19 |
168a,b | 0.37 | 0.36 | -0.7 | -1.18 | 32.49 | 28.6 | 3.56 | 16 | 19462 | 5038 |
169a | 0.07 | 0.83 | -0.91 | -0.94 | NA | 33.8 | Â | 1 | 399 | 7 |
169b,c | NA | NA | NA | NA | NA | 32.5 | Â | 0 | 380 | 7 |
169d-g | -0.01 | 0.52 | -0.74 | -0.98 | NA | 30.01 | Â | 2 | 234 | 9 |
170 | NA | NA | NA | NA | 32.9 | 29.3 | 2.95 | 7 | 5207 | 137 |
171a | 0 | 0.79 | -2.7 | -2.67 | 37.0 | 26.5 | 9.81 | 247 | 39570 | 922 |
171b,c | 0.14 | 0.51 | -1.6 | -1.52 | 36.28 | 26.8 | 8.40 | 5 | 4149 | 91 |
172a,b | 0.08 | 0.79 | -1.47 | -1.55 | 32.69 | 28.9 | 3.14 | 73 | 8220 | 8147 |
172c,d | NA | 0.26 | -0.36 | -0.33 | 32.47 | 28.4 | 3.47 | 1 | 7576 | 8353 |
172e | 0.04 | 0.75 | -1.42 | -1.48 | 32.81 | 28.9 | 3.17 | 6 | 5245 | 2320 |
173 | -0.38 | 0.39 | -1.99 | -1.93 | 34.93 | 29.6 | 4.71 | 1 | 625 | 501 |
319a,b | 0.07 | 0.33 | -0.93 | -0.97 | 36.18 | 27.44 | 8.26 | 5 | 14514 | 713 |
319c | Â | Â | Â | Â | 36.97 | 30.11 | 6.38 | 2 | 13795 | 653 |
390a,b | 0.14 | 0.66 | -1.39 | -1.33 | 33.15 | 24.86 | 7.79 | 2 | 8743 | 695 |
391 | 0.15 | 0.42 | -0.6 | -0.54 | Â | Â | Â | 3 | 14 | 19 |
394a,b | NA | 0.42 | -0.93 | -0.96 | 35.84 | 28.97 | 6.43 | 1 | 21 | 1 |
395a,d,e | -0.04 | 0.11 | -0.49 | -0.47 | NA | 34.91 | Â | 0 | 139 | 2 |
395b,c,f | -0.09 | 0.22 | 0.01 | -0.07 | NA | 31.94 | Â | 0 | 137 | 2 |
396a | NA | 0.72 | NA | -0.76 | 34.87 | 29.34 | 4.91 | 6 | 352 | 19 |
396b | 0.06 | 1.18 | -0.92 | -1.39 | NA | 27.5 | Â | 4 | 371 | 21 |
399b,c | -0.21 | 0.09 | -0.31 | NA | 35.84 | 32.12 | 2.91 | 0 | 485 | 106 |
403 | NA | NA | NA | NA | 36.61 | 30.9 | 4.92 | 1 | 696 | 275 |
414 | 0.18 | 0.11 | -0.42 | -0.66 | Â | Â | Â | NA | 0 | 0 |
419 | 0.17 | 0.31 | -0.47 | -0.32 | NA | NA | Â | NA | 0 | 0 |
447a,b | -0.13 | 0.11 | -0.04 | -0.15 | Â | Â | Â | 0 | 286 | 49 |
447c | -0.26 | -0.1 | 0.22 | 0.23 | NA | NA | Â | 0 | 0 | 0 |