A set of EST-SNPs for map saturation and cultivar identification in melon

BMC Plant Biology

Table 3 Gene diversity indexes for SNP and SSR alleles using all, inodorus or genotypes described in a previous study [28]

Genotypes	Marker type	Major allele frequency	Ho	He	He range
all	SNP	0.69	0.10	0.40	0.14–0.50
inodorus	SNP	0.85*	0.07	0.15	0–0.50
group used in [28]	SNP	0.63	0.09	0.47	0.16–0.50
group used in [28]	SSR	0.47	0.14	0.64	0.51–0.83

Ho, observed heterozygosity; He expected heterozygosity. * Major allele frequency was only calculated for polymorphic SNPs.

ISSN: 1471-2229