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Table 1 Pearson's correlation coefficient values between the four types of methylation alteration at the CCGG sites detected by MSAP and mPing activity in each or all three rice (ssp. indica) genotypes

From: Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice

Genotype

mPing activity

Different types of alteration in cytosine methylation and correlation coefficient values

  

CG Hypo-methylation

CG Hyper-methylation

CHG Hypo-methylation

CHG Hyper-methylation

V14

Excision

0.230

0.731

0.729

-0.196

 

Insertion

0.543

0.723

0.806*

-0.176

V27

Excision

0.242

-0.255

0.064

0.208

 

Insertion

0.843*

0.499

0.767*

0.703

R09

Excision

0.472

0.555

0.866*

-0.012

 

Insertion

0.503

0.132

0.403

0.498

All

Excision

0.488*

0.510*

0.253

0.664**

 

Insertion

0.728**

0.704**

0.558**

0.756**

  1. *Significant at the 0.05 statistic level **Significant at the 0.01 statistic level