Table 5 Total number of DArT markers mapped in sugarcane and aligned to each sorghum chromosome using the BLASTN algorithm
Sorghum bicolour chromosomes | Total number of DArT markers | Total number of DArT markers on the map | Total no. of unique DArT markers on the Q165 map | Hits to NCBI of mapped DArTs | Number of mapped DArT markers that are not genes | Number with no hit to NCBI | Percent of DArT markers mapped that are genes |
|---|---|---|---|---|---|---|---|
Sb1 | 553 | 128 | 105 | 23b (32)a | 62 (76) | 20 | 27 |
Sb2 and Sb8 | 426 (Sb2) 250 (Sb8) | 134 | 113 | 33 (45) | 56 (65) | 24 | 37 |
Sb3 | 449 | 75 | 61 | 20 (28) | 38 (44) | 3 | 34 |
Sb4 | 395 | 126 | 99 | 38 (54) | 52 (63) | 9 | 42 |
Sb5 and Sb6 | 247 (Sb5) 307 (Sb6) | 198 | 154 | 28 (30) | 100 (142) | 26 | 22 |
Sb7 | 252 | 94 | 82 | 24 (27) | 47 (56) | 11 | 34 |
Sb9 | 252 | 107 | 86 | 27 (40) | 51 (59) | 8 | 35 |
Sb10 | 320 | 89 | 72 | 23 (37) | 35 (38) | 14 | 40 |
No hits | 1783 | Â | Â | Â | Â | Â | Â |
Super contigs | 44 | Â | Â | Â | Â | Â | Â |
Total | 5278 | 951 | 772 | 216 | 441 | 115 | 34 |