De novo sequencing, assembly, and analysis of the Taxodium‘Zhongshansa’ roots and shoots transcriptome in response to short-term waterlogging

Table 1 Summary of sequences analysis

Sample	Raw reads	Clean reads	Clean bases	Error (%)	Q20 (%)	Q30 (%)	GC (%)
Root1_1	22398042	20461257	3.07G	0.05	98.03	93.18	44.28
Root1_2	22398042	20461257	3.07G	0.05	97.66	92.42	44.31
Shoot1_1	20428709	17569959	2.64G	0.05	98.40	94.19	45.32
Shoot1_2	20428709	17569959	2.64G	0.07	95.79	86.91	45.37
Root2_1	24059986	21610426	3.24G	0.05	97.88	92.69	44.37
Root2_2	24059986	21610426	3.24G	0.06	96.99	90.46	44.42
Shoot2_1	20592635	17355269	2.6G	0.05	98.31	93.91	45.52
Shoot2_2	20592635	17355269	2.6G	0.09	94.30	83.15	45.58
Summary	174958744	153993822	23.1G

ISSN: 1471-2229