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Table 1 Newly developed molecular markers in the qRgls2 region on chromosome 5

From: High-resolution mapping and characterization of qRgls2, a major quantitative trait locus involved in maize resistance to gray leaf spot

Location*(Mb)

Marker

Forward primer (5'-3')

Reverse primer (5'-3')

Annealing temperature (°C)

Type

67.05

G414

TGCTTCCAAACTCCTCCCTA

GCCTTGAGGGTCACCTTTC

60

SSR

67.51

G520

CACACCACACCAATGCAAAT

CACAGCCATGTTCAGGTCAG

60

SSR

69.40

B96

CCCTGGGCGCAAAGCAAAGG

TCAGACGGTAGTGCAAGGCACC

58

SSR

70.80

G386

CAGCACCCTGCTGGTTATTT

GCGGGTTGAAACCGTAGTAG

58

SSR

70.90

IDP36

TCCTCCTGGCAGTCTAGGAA

TCCGTTTTGTTCTGTTGTGC

60

IDP

71.40

G350

ACCTCTTCGACGCAACACTC

CGTCGATGAACCTCCGTAGA

60

SSR

72.70

G366

GCCTGGAAGCTCGTAGTTGT

GTCCAGTCCGTCCCATAAAA

60

SSR

73.05

G346

CACAGAAGCGTTTCCTTCG

GCTCTGGCTCTGGTTCTAGC

58

SSR

73.11

DD3

GTGTTTCGCCTCTGGATTTC

AAAAACTGCGTTGCCAGTCT

58

IDP

74.05

Q22

GGTGCTCCATTGATTGACCT

CGCCCTGTTCTTATTTGCTC

58

IDP

74.1

DD11

GGAAACAATGGCACACTTCA

GCTTGCATTAGGCTGTTCCT

58

SNP

74.50

G286

TGTCGTCGTTCCATTACGAG

CGGTTTCCGAAAATGAAGAG

60

SSR

74.70

IDP41

TGAAGGCTCCAGCTAATGGT

CCGAGGCACGATAAACATCT

60

IDP

80.19

G241

GATATGGAGGCCCTCTCTCC

ATGATCTCGGTGGTTTCAGG

58

SSR

80.41

G51-1

ATGCACTGATGGGGAGTGAT

TGTTCTCTGAGCACCAGACG

60

SSR

80.83

G206

ATCGGCAGATAAAAGCAGGA

CGGGATAAGGGAGGATGATT

58

SSR

83.08

G192

TTGATGGGCTTAACATTGTCC

TTCGGTTAGGGTGGATTGAG

60

SSR

85.87

G64

GGAAAAGGGAATGGATGGAT

GGAAGGATCAAGGGAAAGGA

58

SSR

95.87

L19

AACTCTGGACTCGCTAGGCA

CCGGATGAAGCTAACTGCA

58

SSR

131.46

xl57

CCGCTCCGCGTATAAAGTAG

CTCTGAAGCCAGGACGGTAG

60

SSR

138.12

G5

CAATGACTTCCGCACCAGTA

CTCGTTGCCGGTCTCTATGT

58

SSR

146.08

35-1

CTCCTTGTTTGGGCCTAATG

TAGGATAAGAGCCCGTGAGC

60

SSR

162.00

xl12

TCCTCCCTCCCTTGATGAAT

CAGGGAGGCTCAGTAATGGA

60

SSR

  1. *Location: The physical location according to B73 RefGen_v2.