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Table 1 Summary of the sequence assembly for four cultivars of C. sinensis

From: De novo assembly and transcriptome characterization: novel insights into catechins biosynthesis in Camellia sinensis

 

Species

Assembly size (n)

Nucleotides (bp)

GC%

Q20%

Average length (bp)

N50 (bp)

Raw reads

Tea_T1

25,733,467

5,118,861,578

44.41

95.70

-

-

 

Tea_T2

21,524,046

4,294,394,519

46.65

95.08

-

-

 

Tea_T3

20,674,230

4,163,349,704

51.08

93.75

-

-

 

Tea_T4

27,082,850

5,387,399,257

46.09

94.21

-

-

Unigene reads

Tea_T1

86,523

51,143,990

-

-

591

829

 

Tea_T2

54,980

33,028,924

-

-

601

923

 

Tea_T3

34,442

18,248,161

-

-

530

700

 

Tea_T4

74,894

44,645,039

-

-

596

890