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Table 2 Various genes perceived during defense response are expressed during SCN inoculation

From: Regulatory interplay between soybean root and soybean cyst nematode during a resistant and susceptible reaction

  

Median log2 RPKM

  

Race 3

Race 14

Function

n

6 dai

8 dai

6 dai

8 dai

β–1,4–G

12

1.14

0.85

0.27

0

4CL

26

0.46

0.69

-1.03

-0.27

A–8 LOX

18

0

1.03

-1.77

-0.59

ChR

5

1.07

1.01

0

-0.53

ChI

6

1.33

0.63

-0.37

-0.62

ChS

15

1.18

1.39

-0.76

-0.73

GST

21

1.15

1.14

-1.02

0

GLY I

5

1.41

1.11

-1.49

-1.39

L–13S LOX

17

0.91

1.40

-1.76

-0.81

PCS

4

0.74

1.49

-1.29

-0.41

PR5

15

1.66

0.54

-1.38

-0.53

PR10

15

1.31

1.12

-1.16

-1.23

PDI

9

1.08

1.60

-0.89

-1.08

RnDR

5

1.39

0

0

0

SOD

8

1.12

0.60

-0.58

0

  1. Numerous genes are involved in defense–response. DE transcripts were binned based on GO or PFAM annotated function, yielding bins of differing size, n.