From: Transcriptomic events associated with internal browning of apple during postharvest storage
 |  |  |  | RPKM |  | |
---|---|---|---|---|---|---|
Malus ID | Gene description | Function | p-value | Healthy | Affected | Fold change |
Energy-related pathways | ||||||
MDP0000192364 | Pyruvate dehydrogenase | Link glycolysis to TCA | <0.001 | 14.53 | 29.39 | 2.02 |
MDP0000129305 | Phosphoglycerate mutase | Glycolysis/dually targeted | 0.016 | 0.91 | 1.80 | 1.98 |
MDP0000295823 | Probable lactate/malate dehydrogenase | Fermentation | <0.001 | 20.06 | 30.24 | 1.51 |
MDP0000622920 | Phosphoenolpyruvate carboxylase | TCA/org transformation | 0.004 | 8.35 | 5.47 | −1.53 |
MDP0000198410 | Aconitate hydratase | TCA/org transformation | 0.016 | 19.75 | 11.72 | −1.69 |
MDP0000798440 | Cytochrome c biogenesis fn | Mitochondrial electron transport/ATP synthesis | 0.014 | 2.67 | 1.52 | −1.76 |
Lipid metabolism | ||||||
MDP0000249250 | Phospholipase a2 | Lipid degradation | 0.004 | 0.49 | 4.25 | 8.65 |
MDP0000576682* | Butyrate-- ligase peroxisomal-like | FA synthesis and FA elongation | 0.01 | 0.20 | 1.30 | 6.63 |
MDP0000794484 | Alpha/beta-Hydrolase | Lipid degradation | 0.003 | 2.60 | 6.33 | 2.43 |
MDP0000833444 | Diacylglycerol kinase-like | Phospholipid synthesis | 0.018 | 2.14 | 5.15 | 2.41 |
MDP0000309977 | Acyl-coenzyme a thioesterase | Lipid degradation/beta-oxidation | 0.004 | 0.95 | 2.23 | 2.36 |
MDP0000849585 | Alpha/beta-Hydrolase | Lipid degradation | 0.009 | 2.85 | 5.69 | 2.00 |
MDP0000283158 | Alpha beta-hydrolase, lipase | Lipid degradation | <0.001 | 4.51 | 7.92 | 1.76 |
MDP0000273425 | Diacylglycerol kinase-like | Phospholipid synthesis | 0.04 | 4.44 | 2.73 | −1.63 |
Redox state | ||||||
MDP0000615196 | Glutaredoxin family protein | Redox state | <0.001 | 0.32 | 1.18 | 3.64 |
MDP0000146621 | Nadh-cytochrome b5 reductase | Redox state | 0.004 | 4.39 | 8.03 | 1.83 |
MDP0000196554 | Chorismate mutase/APX | Aminoacid synthesis/ascorbate metabolism | <0.001 | 11.63 | 19.96 | 1.72 |
MDP0000251669 | Thioredoxin | Redox state | 0.019 | 18.00 | 28.15 | 1.56 |
MDP0000252195 | Ferredoxin-thioredoxin reductase | Redox state | <0.001 | 10.84 | 16.70 | 1.54 |
MDP0000520089* | Desacetoxyvindoline 4- | Ascorbate and glutathione metabolism | 0.041 | 5.41 | 3.53 | −1.53 |
MDP0000181414 | Alpha-ketoglutarate-dependent dioxygenase | Redox state | 0.004 | 6.69 | 4.16 | −1.61 |
Secondary metabolism | ||||||
MDP0000260512 | 4-coumarate: ligase | Phenylpropanoids | 0.001 | 0.16 | 1.05 | 6.71 |
MDP0000576682* | Butyrate-- ligase peroxisomal-like | Sulfur-containing glucosinolates synthesis | 0.01 | 0.20 | 1.30 | 6.63 |
MDP0000206680 | Reticuline oxidase-like | Alkaloid-like | <0.001 | 1.48 | 5.13 | 3.45 |
MDP0000702557* | UDP-glucuronosyl/UDP-glucosyltransferase | Flavonoids/flavonols synthesis | 0.001 | 30.37 | 48.24 | 1.59 |
MDP0000520089* | Desacetoxyvindoline 4- | Sulfur-containing glucosinolates synthesis | 0.041 | 5.41 | 3.53 | −1.53 |
Cell wall | ||||||
MDP0000610961 | L-ascorbate oxidase | Cell wall modifications | <0.001 | 30.35 | 132.43 | 4.36 |
MDP0000873667 | Xyloglucan endotransglucosylase/hydrolase | Cell wall modification | <0.001 | 52.59 | 229.40 | 4.36 |
MDP0000904458 | Fasciclin-like arabinogalactan | Cell wall proteins | <0.001 | 193.78 | 525.70 | 2.71 |
MDP0000723275 | Arabinose 5-phosphate isomerase | Cell wall precursor synthesis | <0.001 | 18.80 | 32.91 | 1.75 |
MDP0000289339 | Cellulose synthase | Cell wall cellulose synthesis | 0.013 | 1.90 | 1.03 | −1.85 |
MDP0000836165 | Pectin methylesterase inhibitor | Cell wall pectin esterases | 0.036 | 2.42 | 1.21 | −2.00 |
MDP0000616949 | Pectin methylesterase inhibitor | Cell wall pectin esterases | 0.01 | 1.04 | 0.44 | −2.37 |