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Figure 6 | BMC Plant Biology

Figure 6

From: Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case

Figure 6

Validation of annotations based on co-expression. Given a set of PGSC genes linked to a biological process by a specific annotation method (i.e., the pipelines or a variant of the ensemble algorithm) the average co-expression of the genes was compared to that of random gene sets. For each annotation method the number of GO terms with p <0.001 (A), and the percentage of GO terms with p <0.001 (B) are shown. Ensemble-2 has a lower percentage of significant GO terms compared to the best single pipeline (BioMart), but it has >1.5 fold more significant GO terms.

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