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Table 1 Associations between traits and biological processes a

From: Prioritization of candidate genes in QTL regions based on associations between traits and biological processes

Input data

 

#traits

179

#QTL regions

1591

#BP terms

1767

#relevant BP terms b

1522

Prioritization results

 

#trait-BP associations

2519

#traits involved

153

#BP terms involved

918

  1. aAs intermediate step in candidate gene prioritization, traits and biological processes (BPs) were associated using overrepresentation of biological processes found for genes connected with each trait in the rice Gramene QTL compendium.
  2. bOnly BP terms which were associated with less than 1% of the genes in the genome were used as input terms in our analysis (i.e., a filter on the maximum allowed generality of the biological process was applied).
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BMC Plant Biology

ISSN: 1471-2229

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