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Table 5 Bioinformatic analysis of functional annotation based on Pfam of the 75 predicted genes in the genomic region on Morex 5HL at the RphCantala locus based on linkage disequilibrium analysis performed on linked DArT-seq markers

From: Genetic mapping of a new race specific resistance allele effective to Puccinia hordei at the Rph9/Rph12locus on chromosome 5HL in barley

Gene identifyer Physical postion in Morex genome Sequence annotation Pfam Length (amino acid residues)
MLOC_67435 Chromosome 5: 504,807,504-504,808,889 Uncharacterised protein 1282
MLOC_63880 Chromosome 5: 504,837,984-504,844,416 Uncharacterised protein 4770
MLOC_63879 Chromosome 5: 504,837,985-504,840,518 Peptidase domain 1900
MLOC_14877 Chromosome 5: 504,848,281-504,851,127 Uncharacterised protein 2578
MLOC_72642 Chromosome 5: 504,851,380-504,854,051 Uncharacterised protein/transmembrane 818
MLOC_15752 Chromosome 5: 504,856,869-504,860,258 Uncharacterised protein//serine/threonine protein kinase 1279
MLOC_67813 Chromosome 5: 504,866,847-504,868,082 Uncharacterised protein 156
MLOC_58355 Chromosome 5: 504,868,629-504,870,096 Uncharacterised protein/Myb homeobox 96
MLOC_39379 Chromosome 5: 504,881,559-504,882,690 CytochromeP450/uncharacterised protein 193
MLOC_55782 Chromosome 5: 505,224,634-505,228,648 Uncharacterised protein/Bromodomain 350
MLOC_12507 Chromosome 5: 505,231,551-505,235,061 Transmembrane domain/uncharacterised protein 99
MLOC_56550 Chromosome 5: 505,251,077-505,252,833 Uncharacterised protein 212
MLOC_67579 Chromosome 5: 505,267,327-505,268,018 Uncharacterised protein 73
MLOC_79114 Chromosome 5: 505,304,761-505,305,695 Uncharacterised protein 180
MLOC_38843 Chromosome 5: 505,401,971-505,402,516 Uncharacterised protein/zipper 144
MLOC_22183 Chromosome 5: 505,411,541-505,418,638 Uncharacterised protein 345
MLOC_22184 Chromosome 5: 505,411,592-505,420,058 Microtubule-associated protein 556
MLOC_44070 Chromosome 5: 505,421,803-505,425,401 Uncharacterised protein 346
MLOC_61309 Chromosome 5: 505,435,524-505,436,686 Uncharacterised protein 176
MLOC_67384 Chromosome 5: 505,437,805-505,442,456 Uncharacterised protein/BIPPOZ fold 190
MLOC_14335 Chromosome 5: 505,450,976-505,451,416 Uncharacterised protein 46
MLOC_78241 Chromosome 5: 505,457,197-505,458,593 Glycosyltransferase 2 363
MLOC_37117 Chromosome 5: 505,487,438-505,491,448 Uncharacterised protein/MIP1 Leuczipper 608
MLOC_63425 Chromosome 5: 505,505,232-505,509,647 Uncharacterised/AP2 transcription factor 631
MLOC_58589 Chromosome 5: 505,517,232-505,521,660 Eukaryotic translation initiation factor 3 subunit C 868
MLOC_71335 Chromosome 5: 505,523,834-505,525,773 Cytochrome P450/Uncharacterised protein 453
MLOC_44341 Chromosome 5: 505,572,931-505,576,253 Uncharacterised protein 515
MLOC_11008 Chromosome 5: 505,604,769-505,610,921 Kinesin motor domain/uncharacterised protein 340
MLOC_55124 Chromosome 5: 506,586,998-506,588,618 Ribosomal S14/predicted protein 56
MLOC_55125 Chromosome 5: 506,594,987-506,597,286 Uncharacterised protein 284
MLOC_64140 Chromosome 5: 506,607,831-506,611,618 Malate dehydrogenase 358
MLOC_39143.3 Chromosome 5: 506,613,176-506,622,502 Uncharacterised protein 503
MLOC_4524 Chromosome 5: 506,631,764-506,637,466 Uncharacterised protein 144
MLOC_63065 Chromosome 5: 506,640,602-506,644,654 Uncharacterised protein/protein-kinase domain leucine rich repeat 608
MLOC_37278 Chromosome 5: 506,647,621-506,649,939 Uncharacterised/cytP450 515
MLOC_11920 Chromosome 5: 506,671,388-506,671,569 Uncharacterised protein  
MLOC_61101 Chromosome 5: 506,676,442-506,678,678 Alpha/beta hydrolase domain/uncgharacterised 377
MLOC_52788 Chromosome 5: 506,712,820-506,716,335 Alpha-tubulin 4 451
MLOC_52896.1 Chromosome 5: 506,720,817-506,722,983 Myb/Homeobox/Uncharacterised protein 299
MLOC_77955 Chromosome 5: 506,728,560-506,729,777 Homeobox/leucine zipper/uncharacterised protein 154
MLOC_52360.1 Chromosome 5: 506,734,900-506,736,938 tRNA-butesine synthase/uncharacterised protein 240
MLOC_52361 Chromosome 5: 506,737,533-506,741,133 Pentatricopeptide/uncharacterised 682
MLOC_17956 Chromosome 5: 506,743,784-506,750,717 Uncharacterised protein/N-acetylglucosaminyl transferase component (Gpi1) 541
MLOC_66827 Chromosome 5: 506,758,816-506,764,116 AMP-binding enzyme/uncharacterised protein 700
MLOC_71512 Chromosome 5: 506,765,725-506,767,027 Oligopeptide transporter 292
MLOC_71514 Chromosome 5: 506,771,066-506,774,511 Uncharacterised protein 947
MLOC_36533 Chromosome 5: 506,774,624-506,778,739 Giberellin signalling 548
MLOC_36533 Chromosome 5: 506,779,918-506,782,319 NB-ARC protein/uncharacterised protein 591
MLOC_79498 Chromosome 5: 506,783,900-506,786,958 Peptidase/protein inhibition/Uncharacterised protein 377
MLOC_17927 Chromosome 5: 506,792,732-506,798,457 WRKY transcription factor /Uncharacterised protein 1032
MLOC_66348 Chromosome 5: 506,818,362-506,820,563 NAM protein 337
MLOC_16892 Chromosome 5: 506,827,938-506,828,895 Tetraspanin/peripherin/uncharacterised protein 183
MLOC_14114 Chromosome 5: 506,834,758-506,838,333 FAD reductase/uncharacterised 430
MLOC_23699 Chromosome 5: 506,884,357-506,888,420 RNA polymerase III 120
MLOC_70664 Chromosome 5: 506,907,468-506,911,192 Lipoxygenase 863
MLOC_17894 Chromosome 5: 506,912,481-506,913,432 Uncharacterised protein 145
MLOC_10360 Chromosome 5: 506,913,595-506,916,553 NBS-ARC-LRR disease resistance protein/Uncharacterised 766
MLOC_19228 Chromosome 5: 506,923,278-506,929,445 Cullin repeat-like superfamily 351
MLOC_3679 Chromosome 5: 506,929,610-506,930,486 GTP binding Elongation factor 113
MLOC_10567 Chromosome 5: 506,948,227-506,953,875 Inosine-5′-monophosphate dehydrogenase 496
MLOC_44818 Chromosome 5: 506,995,429-506,995,800 Uncharacterised protein 30
MLOC_76586 Chromosome 5: 506,996,531-506,997,720 Uncharacterised protein 51
MLOC_66071 Chromosome 5: 509,522,514-509,527,272 Calmodulin binding protein/uncharacterised 588
MLOC_66074 Chromosome 5: 509,528,020-509,529,376 Photosystem I reaction center subunit III 439
MLOC_62114 Chromosome 5: 509,534,583-509,540,642 Calmodulin binding protein/uncharacterised 615
MLOC_61300 Chromosome 5: 509,556,146-509,556,624 Uncharacterised protein/Zinc finger 137
MLOC_61302 Chromosome 5: 509,560,844-509,561,551 Uncharacterised protein/Zinc finger 156
MLOC_2917 Chromosome 5: 509,561,748-509,564,141 Protein binding GTP-Elongation Factor 322
MLOC_66343 Chromosome 5: 509,613,233-509,613,914 Uncharacterised protein 59
MLOC_7003 Chromosome 5: 509,663,223-509,664,904 Chaperone J 96
MLOC_4695 Chromosome 5: 509,722,893-509,727,266 F-box domain cyclin/Uncharacterised protein 411
MLOC_66212 Chromosome 5: 509,843,699-509,844,569 Uncharacterised protein 245
MLOC_4789 Chromosome 5: 509,860,275-509,861,218 Uncharacterised protein 146
MLOC_12556 Chromosome 5: 509,866,159-509,866,865 Uncharacterised protein 110
MLOC_66971 Chromosome 5: 509,878,445-509,880,991 Ribose 5P isomerase