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Table 1 Estimates of nucleotide diversity and test statistics at nrITS, matK and trnH-psbA locus on St-genome in species of Elymus sensu lato

From: Phylogeny and differentiation of the St genome in Elymus L. sensu lato (Triticeae; Poaceae) based on one nuclear DNA and two chloroplast genes

 

Gene

n

s

Ï€

θw

Fu & Li’s D

Tajima’s D

StH species

nrITS

512

46

0.0142

0.0250

−2.2572 (0.10 > P > 0.05)

−1.7192 (0.10 > P > 0.05)

matK

750

20

0.0035

0.0069

−2.5829 (P < 0.05)

−1.7801 (0.10 > P > 0.05)

trnH-psbA

559

10

0.0039

0.0046

−1.2038 (P > 0.10)

−0.5366 (P > 0.10)

StY species

nrITS

499

22

0.0108

0.0133

−0.8768 (P > 0.10)

−0.7672 (P > 0.10)

matK

751

11

0.0024

0.0043

−1.8900 (P > 0.10)

−1.6981 (0.10 > P > 0.05)

trnH-psbA

559

9

0.0026

0.0048

−2.5326 (P < 0.05)

−1.6134 (0.10 > P > 0.05)

StYW species

nrITS

516

14

0.0077

0.0105

−1.4635 (P > 0.10)

−1.3534 (P > 0.10)

matK

751

8

0.0032

0.0039

−0.7308 (P > 0.10)

−0.7695 (P > 0.10)

trnH-psbA

565

9

0.0062

0.0059

−0.1073 (P > 0.10)

0.2621 (P > 0.10)

StYP species

nrITS

--

--

--

--

--

--

matK

754

4

0.0019

0.0020

−0.2642 (P > 0.10)

−0.0754 (P > 0.10)

trnH-psbA

564

5

0.0020

0.0033

−1.8812 (0.10 > P > 0.05)

−1.6775 (0.10 > P > 0.05)

StYH species

nrITS

513

18

0.0104

0.0129

−0.7412 (P > 0.10)

−0.9514 (P > 0.10)

matK

750

6

0.0018

0.0027

−1.7133 (P > 0.10)

−1.1962 (P > 0.10)

trnH-psbA

560

10

0.0059

0.0060

−0.5505 (P > 0.10)

−0.0104 (P > 0.10)

StStH species

nrITS

515

6

0.0062

0.0064

−0.3145 (P > 0.10)

−0.3145 (P > 0.10)

matK

754

4

0.0027

0.0029

−0.7801 (P > 0.10)

−0.7801 (P > 0.10)

trnH-psbA

--

--

--

--

--

--

Pseudoroegneria

nrITS

514

9

0.0079

0.0077

−0.0922 (P > 0.10)

−0.1890 (P > 0.10)

matK

753

5

0.0022

0.0029

−1.3683 (P > 0.10)

−1.3370 (P > 0.10)

trnH-psbA

564

8

0.0066

0.0062

0.0777 (P > 0.10)

0.3865 (P > 0.10)

  1. The n is the number of the sites (excluding sites with gaps/missing data), s is the number of segregating sites, π is the average pairwise diversity, and θ w is the diversity based on the number of segregating sites.