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Table 1 Summary of P. ginseng root transcriptome data acquired in this study

From: Comprehensive analysis of Panax ginseng root transcriptomes

Sample

Raw

After filtering

No. of reads

Length (bp)

No. of reads

Length (bp)

One-year-old roots

    

Whole roots, replicate 1

33,390,674

3,372,458,074

32,177,717

3,517,631,636

Whole roots, replicate 2

14,967,974

2,087,854,507

13,474,584

1,873,238,319

Whole roots, replicate 3

15,363,222

2,152,050,739

13,768,020

1,922,229,967

Six-year-old roots

    

Main body, replicate 1

33,991,964

3,433,188,364

32,893,508

3,247,044,556

Main body, replicate 2

12,654,102

1,760,838,610

11,308,086

1,567,923,239

Main body, replicate 3

16,326,086

2,265,681,167

14,617,400

2,020,797,690

Lateral roots, replicate 1

33,938,598

3,427,798,398

32,883,593

3,248,608,642

Lateral roots, replicate 2

18,047,934

2,513,373,878

16,017,038

2,221,382,191

Lateral roots, replicate 3

16,166,344

2,261,990,497

14,277,362

2,261,990,497

Rhizomes, replicate 1

34,968,250

3,531,793,250

33,898,134

3,350,538,852

Rhizomes, replicate 2

17,900,886

2,505,960,830

15,937,196

2,222,852,715

Rhizomes, replicate 3

14,435,664

2,012,659,529

12,940,042

1,797,688,838

In vitro cultured roots

    

Adventitious roots [17]

90,242,024

9,114,444,424

85,335,736

8,441,707,472

Total

352,393,722

40,440,092,267

329,528,416

37,693,634,614