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Table 2 Responsive genes up-regulated in the ask1 mutant transcriptome

From: Proteomics and transcriptomics analyses of Arabidopsis floral buds uncover important functions of ARABIDOPSIS SKP1-LIKE1

Gene ID

Gene name/description

Signaling pathways/responses

AT5G54490

PINOID-BINDING PROTEIN 1 (PBP1)

Auxin

AT3G09870

SAUR-like auxin-responsive protein

Auxin

AT5G61600

ETHYLENE RESPONSE FACTOR 104 (ERF104)

Ethylene

AT4G34410

REDOX RESPONSIVE TRANSCRIPTION FACTOR 1

Ethylene

AT1G19180

JASMONATE-ZIM-DOMAIN PROTEIN 1 (JAZ1)

Jasmonic acid

AT1G17380

JASMONATE-ZIM-DOMAIN PROTEIN 5 (JAZ5)

Jasmonic acid

AT3G11480

SABATH methyltransferase

Jasmonic acid, fungus, wounding

AT4G27280

Calcium-binding EF-hand family protein

Karrikin

AT3G02380

CONSTANS-LIKE 2 (COL2)

Light

AT3G22840

EARLY LIGHT-INDUCABLE PROTEIN1 (ELIP1)

Light

AT4G14690

EARLY LIGHT-INDUCIBLE PROTEIN 2 (ELIP2)

Light

AT3G17609

HY5-HOMOLOG (HYH)

Light

AT3G59060

PHYTOCHROME INTERACTING FACTOR 3-LIKE 6

Light

AT5G59820

RESPONSIVE TO HIGH LIGHT 41 (RHL41)

Light

AT2G30520

ROOT PHOTOTROPISM 2 (RPT2)

Light

AT2G46830

CIRCADIAN CLOCK ASSOCIATED 1 (CCA1)

Circadian

AT1G01060

LATE ELONGATED HYPOCOTYL (LHY)

Circadian

AT3G09600

REVEILLE 8 (RVE8)

Circadian

AT3G12580

HEAT SHOCK PROTEIN 70 (HSP70)

Heat

AT5G51440

HSP20-like

Heat

AT2G31380

SALT TOLERANCE HOMOLOGUE (STH)

Salt

AT1G27730

SALT TOLERANCE ZINC FINGER (STZ)

Salt

AT3G55980

SALT-INDUCIBLE ZINC FINGER 1 (SZF1)

Salt

AT2G33380

RESPONSIVE TO DESICCATION 20 (RD20)

Desiccation

AT5G24660

RESPONSE TO LOW SULFUR 2 (LSU2)

Sulfur deficiency

AT1G19640

JASMONIC ACID CARBOXYL METHYLTRANSFERASE

Wounding, and methyljasmonate

AT5G64510

TUNICAMYCIN INDUCED 1 (TIN1)

ER-stress, heat, light, hydrogen peroxide

AT5G57560

TOUCH 4 (TCH4)

Mechanical stimulus

AT1G12110

NITRATE TRANSPORTER 1.1 (NRT1.1)

Nitrate, water deprivation

AT1G61800

GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2 (GPT2)

Glucose, sucrose, karrikin, nematode

AT2G46400

WRKY DNA-BINDING PROTEIN 46

Chitin

AT5G51190

Ethylene response factor

Chitin, wounding

AT3G61190

BON ASSOCIATION PROTEIN 1 (BAP1)

Chitin, cold, fungus, heat, jasmonic acid, salicylic acid, wounding

AT4G11280

ACC SYNTHASE 6 (ACS6)

ABA, auxin, chitin, ethylene, jasmonic acid, oxidative stress, wounding

AT5G59310

LIPID TRANSFER PROTEIN 4 (LTP4)

ABA, cold, salt, water deprivation

AT4G25100

FE SUPEROXIDE DISMUTASE 1 (FSD1)

Cadmium ion, copper ion, oxidative stress

AT1G02930

GLUTATHIONE S-TRANSFERASE 6

Cadmium ion, oxidative stress, salt, water deprivation

AT3G21890

B-box type zinc finger protein

UV-B, sucrose

AT2G37040

PHE AMMONIA LYASE 1 (PAL1)

UV-B, karrikin, oxidative stress, wounding