Genome-wide identification and transcriptional analysis of folate metabolism-related genes in maize kernels

BMC Plant Biology

Table 2 Genes involved in C1 metabolism in maize

Gene identifier	Accession number	Gene function	Protein abbreviation	Sequence similarity among orthologs
GRMZM2G135283	B6T7Q7	SHMT1	SHMT1
GRMZM2G399183	K7UCR4	GDCH	GCSH1	GCSH1 and GCSH2: 72.3 %; GCSH1 and GCSH3: 71.2 %
GRMZM2G010321	B4FUR6	GDCH	GCSH2	GCSH1 and GCSH4: 73.1 %; GCSH2 and GCSH3: 96.2 %
GRMZM2G051208	C4JBL9	GDCH	GCSH3	GCSH2 and GCSH4: 93.8 %; GCSH3 and GCSH4: 94.8 %
GRMZM2G020288	K7TZ76	GDCH	GCSH4	GCSH2 and GCSH4: 93.8 %; GCSH3 and GCSH4: 94.8 %
GRMZM2G104310	K7TX08	GDCP	GCSP
GRMZM5G876898	B6TQ06	GDCT	GCST
GRMZM2G130790	C4JC05	DHC	FOLD1	FOLD1 and FOLD2: 66.6 %
GRMZM2G150485	K7UXQ3	DHC	FOLD2	FOLD1 and FOLD3: 67.6 %
AC233922.1_FG005	B7ZXD5	DHC	FOLD3	FOLD2 and FOLD3: 61.0 %
GRMZM2G347056	NP_001104947	MTHFR	MTHR1	MTHR1 and MTHR2: 94.5 %
GRMZM2G034278	A0A096QBQ5	MTHFR	MTHR2	MTHR1 and MTHR2: 94.5 %
GRMZM2G149751	A0A096SHX7	MS	MS1	MS1 and MS2: 96.3 %
GRMZM2G112149	A0A096RTH2	MS	MS2	MS1 and MS3: 96.7 %
GRMZM2G165747	B6UF55	MS	MS3	MS2 and MS3: 99.0 %
GRMZM2G168281	K7WHT7	10-FDF	PURU
GRMZM5G824944	A0A096U8U8	FTHS	FTHS
GRMZM5G807835	A0A096U6Q0	5-FCL	5FCL	5FCL and 5FCLL: 51.2 %
GRMZM2G001904	K7TIY8	5-FCL	5FCLL	5FCL and 5FCLL: 51.2 %

Note: All accession numbers were obtained from www.uniprot.org [38], with the exception of the accession number of MTHR1, which was from http://www.ncbi.nlm.nih.gov [36]

ISSN: 1471-2229