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Table 4 Conserved domains in enzymes of C1 metabolism in maize, Arabidopsis, and E. coli

From: Genome-wide identification and transcriptional analysis of folate metabolism-related genes in maize kernels

Enzymes Domain numbers Domain names Domain size in AA Enzymes Domain numbers Domain names Domain size in AA
ZmSHMT1 1 SHMT 398 ZmMTHR1 1 MTHFR 297
AtSHMT1 1 SHMT 398 ZmMTHR2 1 MTHFR 266
EcGLYA 1 SHMT 378 AtMTHR1 1 MTHFR 295
ZmGCSH1 1 GCV_H 120 AtMTHR2 1 MTHFR 295
ZmGCSH2 1 GCV_H 120 EcMETF 1 MTHFR 280
ZmGCSH3 1 GCV_H 120 ZmMS1 2 Meth_synt_1 317
ZmGCSH4 1 GCV_H 99 Meth_synt_2 324
AtGCSH1 1 GCV_H 120 ZmMS2 2 Meth_synt_1 316
AtGCSH2 1 GCV_H 120 Meth_synt_2 324
AtGCSH3 1 GCV_H 120 ZmMS3 2 Meth_synt_1 316
EcGCSH 1 GCV_H 121 Meth_synt_2 324
ZmGCSP 2 GDC-P 428 AtMS1 2 Meth_synt_1 316
GDC-P 291 Meth_synt_2 324
AtGCSP1 2 GDC-P 427 AtMS2 2 Meth_synt_1 316
GDC-P 288 Meth_synt_2 324
AtGCSP2 2 GDC-P 428 AtMS3 2 Meth_synt_1 316
GDC-P 290 Meth_synt_2 324
EcGCSP 2 GDC-P 424 EcMETH 5 S-methyl_trans 311
GDC-P 354 Pterin_bind 212
ZmGCST 3 GCV_T 152 B12-binding 104
GCV_T_C 92 B12-binding_2 83
GCV_T 89 Met_synt_B12 273
AtGCST 2 GCV_T 215 ZmFTHS 1 FTHFS 620
GCV_T_C 92 AtFTHS 1 FTHFS 620
EcGCST 2 GCV_T 208 ZmPURU 1 Formyl_trans_N 178
GCV_T_C 92 AtPURU1 1 Formyl_trans_N 178
ZmFOLD1 2 THF_DHG_CYH 117 AtPURU2 1 Formyl_trans_N 178
THF_DHG_CYH_C 167 EcPURU 1 Formyl_trans_N 177
ZmFOLD2 2 THF_DHG_CYH 117 Zm5FCL 1 5-FTHF_cyc-lig 205
THF_DHG_CYH_C 105 At5FCL 1 5-FTHF_cyc-lig 203
ZmFOLD3 2 THF_DHG_CYH 117 Ec5FCL 1 5-FTHF_cyc-lig 175
THF_DHG_CYH_C 167 Zm5FCLL 1 5-FTHF_cyc-lig 101
AtFOLD1 2 THF_DHG_CYH 117 At5FCLL 1 5-FTHF_cyc-lig 198
THF_DHG_CYH_C 167     
AtFOLD2 2 THF_DHG_CYH 117     
THF_DHG_CYH_C 167     
AtFOLD3 2 THF_DHG_CYH 53     
THF_DHG_CYH_C 167     
AtFOLD4 2 THF_DHG_CYH 117     
THF_DHG_CYH_C 167     
EcFOLD 2 THF_DHG_CYH 117     
THF_DHG_CYH_C 159     
  1. Note: All domain information was extracted from http://smart.embl-heidelberg.de/ [15]
  2. AA represents amino acid