Skip to main content

Table 4 Integrated confidence interval limits for repeated QTLs and number of total and most probable positional candidate genes

From: Identification of stable QTLs for vegetative and reproductive traits in the microvine (Vitis vinifera L.) using the 18 K Infinium chip

     

Number of candidate genes

Number of relevant candidate genes

Traits

Chromosome

Start position (bp)

Stop position (bp)

Length (Mb)

CRIBI annotation

REFSEQ annotation

Totalb

Involved in appropriate functions

And expressed in appropriate organs

LA

4

20322895

23912829

3.6

220

204

353

79

33

LA

19

1859933

4965830

3.1

231

185

377

41

25

ToAG

5

16515489

27520474

11.0

447

341

765

27

19

BWG

7

4916723

15195449

10.9a

400

320

617

122

65

BWM

7

6319558

14198046

7.9

261

227

400

102

62

MOG

7

5465273

16113558

10.6

383

300

654

40

16

MTG

7

5303765

16113558

10.8

399

316

686

40

16

NB

7

6177689

20219664

14.0

723

549

1201

86

52

NB

14

19704668

23504652

3.8

172

164

302

38

32

NC

7

8922964

15861847

6.9

200

126

306

23

11

NS

7

6461425

14101459

7.6

250

216

436

36

28

TaG

4

8840288

16951127

8.1

192

163

336

19

10

TaG

7

5096194

14716952

9.6

352

294

613

44

19

TOG

7

5303765

15673945

10.4

368

295

634

40

16

  1. a10.3 Mb from chromosome 7 and 0.6 Mb from Unknown chromosome according to the genetic map
  2. bSome genes are common between the two annotations