No. | Candidate gene | Chromosome | Physical position (AGP v.2) | SNP | Allele | P value | FDR* | MAFa | R2 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|
1 | GRMZM2G009715 | 3 | 87786034 | SYN15223 | G,A | 1.63E-05 | 0.040 | 0.14 | 0.02 | Potassium uptake protein TrkA |
2 | Intergenic | 3 | 91910150 | PZE-103066271 | A,G | 2.12E-05 | 0.051 | 0.05 | 0.02 | Â |
3 | Intergenic | 3 | 92149095 | PZE-103066064 | C,A | 7.73E-06 | 0.039 | 0.07 | 0.02 | Â |
4 | Intergenic | 3 | 103166745 | PZE-103062307 | A,G | 1.14E-06 | 0.021 | 0.09 | 0.03 | Â |
5 | Intergenic | 3 | 103544700 | PZE-103062210 | A,G | 9.29E-06 | 0.039 | 0.17 | 0.02 | Â |
6 | Intergenic | 3 | 103769943 | PZE-103062159 | A,C | 9.79E-06 | 0.039 | 0.13 | 0.02 | Â |
7 | Intergenic | 3 | 146026075 | PZE-103087994 | A,C | 1.35E-05 | 0.040 | 0.3 | 0.02 | Â |
8 | Intergenic | 4 | 153495851 | PZE-104079154 | G,A | 4.17E-06 | 0.039 | 0.25 | 0.03 | Â |
9 | GRMZM2G080842 | 4 | 153499805 | SYN13972 | A,G | 8.29E-06 | 0.039 | 0.24 | 0.02 | Mitochondrial carrier protein |
10 | GRMZM2G080842 | 4 | 153500453 | SYN13976 | C,A | 1.09E-05 | 0.039 | 0.24 | 0.02 | Mitochondrial carrier protein |
11 | GRMZM2G080842 | 4 | 153500492 | SYN13977 | A,G | 1.23E-05 | 0.040 | 0.23 | 0.02 | Mitochondrial carrier protein |
12 | GRMZM2G080842 | 4 | 153501980 | PZE-104079162 | C,A | 1.04E-05 | 0.039 | 0.25 | 0.02 | Mitochondrial carrier protein |
13 | GRMZM2G080842 | 4 | 153502008 | PZE-104079163 | A,G | 1.07E-05 | 0.039 | 0.24 | 0.02 | Mitochondrial carrier protein |
14 | GRMZM2G171605 | 4 | 186590896 | PZE-104110312 | A,G | 1.84E-06 | 0.021 | 0.18 | 0.03 | 4'phosphopantetheinyl transferase |
15 | GRMZM2G168807 | 5 | 165320067 | SYN16674 | A,C | 1.50E-05 | 0.040 | 0.32 | 0.02 | WW/Rsp5/WWP |
16 | Intergenic | 5 | 187471551 | PZE-105130754 | A,G | 1.47E-05 | 0.040 | 0.28 | 0.03 | Â |
17 | GRMZM2G151651 | 7 | 33447828 | SYNGENTA5726 | G,A | 1.79E-06 | 0.021 | 0.08 | 0.03 | Â |
18 | GRMZM2G020254 | 10 | 65416520 | PZE-110034333 | A,G | 1.24E-06 | 0.021 | 0.21 | 0.03 | DNA-binding WRKY |
19 | GRMZM2G089484 | 10 | 88686456 | PZE-110047506 | G,A | 1.59E-05 | 0.040 | 0.4 | 0.02 | Tyrosine protein kinase |