Level of sequence conservation | Transcribed in | Abbreviation | A. thaliana LncRNA | A. thaliana gene | Function | Reference |
---|---|---|---|---|---|---|
Brass. Specific | Ath | Bras_PDE318 | At1NC112890 | AT1G80770 | Pigment defective 318 (PDE318) | Â |
Brass. Specific | Ath | Bras_Root | At2NC078030 | AT2G47750 | Morphological Effect: Root Growth | [44] |
Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length. | ||||||
Brass. Specific | Ath | Bras_SaltStress | At5NC030470 | AT5G24270 | Response To Salt Stress | [45] |
Encodes a calcium sensor that is essential for K+ nutrition, K+/Na + selectivity, and salt tolerance | ||||||
Brass. Specific | Ath | Bras_SeedCoat | At5NC103231 | AT5G67180 | Morphological Effect: Seed Coat Mucilage | [46] |
Target of early activation tagged (EAT) 3 (TOE3) | ||||||
Ae. Specific | Ae | Ae_NuclStruc | At1NC016180 | AT1G13230 | Required for growth promotion and enhanced seed production mediated by the endophytic fungus Piriformospora indica in Arabidopsis. | Â |
Ae. Specific | Ae | Ae_SaltStress | At1NC070280 | AT1G50640 | Response To Salt Stress and Involved in Leaf Senescence. Ethylene Responsive Element Binding Factor 3 (ERF3) | [47, 48] |
Ae. Specific | Ae | Ae_StomatalDev | At1NC099220 | AT1G70410 | Morphological Efffect: Stomatal Development | [49] |
Beta Carbonic Anhydrase 4 (BCA4) | ||||||
Ae. Specific | Ae | Ae_RepairPSII | Group1797 | AT1G75690 | Physiological Effect: Repair of Photosystem II | [50] |
Low Quantum Yield of Photosystem II 1 (LQY1) | ||||||
Ae. Specific | Ae | Ae_Miro2 | Group4790 | AT3G63150 | Physiological Effect: Embryo Genesis and Mitochondrial Morphogenesis. Miro-Related GTP-ASE 2 (MIRO2) | [51] |
Cleo. Specific | Cleo | Cleo_bHLH | Group4645 | AT3G57800 | Basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Transcription Factor Family | [52] |
Cleo. Specific | Cleo | Cleo_Unknown | Seed_Group2679 | AT3G06020 | Regulation of shootmeristem size (FAF4). | [53] |
Cleo. Specific | Cleo | Cleo_CCD1 | Group4801 | AT3G63520 | Specifically expressed in vascular tissue. | [54] |
Carotenoid Cleavage Dioxygenase 1 (CCD1) |