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Table 5 List of SNPs significantly associated with seedling resistance to race TKTTF

From: Association mapping of North American spring wheat breeding germplasm reveals loci conferring resistance to Ug99 and other African stem rust races

SNP Chra Pos (cM) P value R2 (%)b
IWB31876 0 0.0 8.08E-04 9.7
IWB71333 0 0.0 4.84E-04 9.6
IWB57448 1A 21.5 8.57E-04 9.3
IWA8622 1A 24.4 2.26E-04 9.2
IWB22324 4A 142.3 5.22E-06 9.1
IWA4651 4A 144.4 3.10E-08 8.8
IWB27971 4A 144.4 1.97E-05 7.5
IWB34478 4A 144.4 3.37E-05 6.8
IWB34733 4A 144.4 1.54E-11 4.9
IWB3569 4A 144.4 3.95E-05 3.9
IWB61312 4A 144.4 3.95E-05 3.7
IWB63979 4A 144.4 1.19E-09 3.5
IWB68386 4A 144.4 8.24E-04 3.2
IWA1505 4A 145.2 1.15E-08 3.1
IWA3449 4A 147.1 3.83E-05 3.9
IWB2554 4A 147.1 1.61E-05 3.2
IWB62397 4A 147.1 3.09E-04 13.9
IWB12146 4A 150.7 5.47E-07 11.1
IWB47019 4A 150.7 4.39E-07 9.2
IWB59346 4A 150.7 5.93E-06 8.7
IWB1407 4A 151.2 5.19E-05 8.1
IWB14910 4A 151.2 3.47E-05 8.0
IWB71978 4A 151.2 3.47E-05 8.0
IWB59368 4A 151.3 3.14E-04 7.8
IWB68322 4A 151.3 9.43E-06 7.6
IWB53393 4A 153.0 1.35E-04 7.6
IWB35434 4A 154.1 8.01E-04 7.5
IWB51926 4A 154.3 2.22E-04 7.5
IWB59099 4A 154.3 9.09E-06 7.4
IWB70193 4A 154.3 5.34E-06 7.4
IWB35545 4A 163.8 9.37E-07 7.4
IWA1410 4A 164.1 5.23E-08 7.1
IWA4084 4A 164.1 2.39E-08 7.0
IWA4858 4A 164.1 4.55E-07 6.9
IWA5353 4A 164.1 1.49E-06 6.9
IWA7364 4A 164.1 2.46E-08 6.5
IWA7365 4A 164.1 1.38E-08 6.4
IWB21715 4A 164.1 5.74E-08 6.0
IWB23332 4A 164.1 2.85E-07 6.0
IWB26256 4A 164.1 2.37E-06 6.0
IWB26495 4A 164.1 1.85E-07 5.7
IWB275 4A 164.1 3.45E-07 5.7
IWB27679 4A 164.1 5.06E-04 5.4
IWB29568 4A 164.1 1.69E-07 5.4
IWB3001 4A 164.1 3.44E-07 5.3
IWB31447 4A 164.1 5.51E-07 5.0
IWB34609 4A 164.1 1.17E-06 4.9
IWB36388 4A 164.1 4.52E-07 4.9
IWB4517 4A 164.1 1.46E-05 4.9
IWB48829 4A 164.1 9.10E-07 4.9
IWB49256 4A 164.1 5.08E-07 4.7
IWB52393 4A 164.1 1.16E-06 4.2
IWB6097 4A 164.1 2.58E-06 3.9
IWB72383 4A 164.1 2.60E-08 3.7
IWB9276 4A 164.1 1.90E-07 3.7
IWA2224 5A 88.0 8.03E-04 3.5
IWA2836 5A 94.9 5.08E-04 3.2
IWB34927 5A 94.9 9.63E-04 3.2
IWB72540 6B 108.9 6.96E-04 3.5
IWA3268 6B 109.9 2.33E-04 3.2
IWA5605 6B 109.9 3.19E-04 3.1
IWA5606 6B 109.9 9.46E-04 10.1
IWB56595 6B 109.9 2.40E-04 9.3
IWB2749 6B 110.4 7.59E-04 9.3
IWB2751 6B 110.4 4.59E-04 8.3
IWB43467 6B 110.4 5.88E-04 7.4
IWB48603 6B 110.4 4.34E-04 7.3
IWB50367 6B 110.4 1.37E-04 6.7
IWB56594 6B 110.4 5.88E-04 6.7
IWB61565 6B 110.4 3.01E-04 6.7
IWB65679 6B 110.4 6.45E-04 6.1
IWB43133 6B 113.3 5.16E-04 5.3
IWB61528 6B 113.3 5.16E-04 5.2
IWB14375 6B 113.7 1.68E-04 4.8
IWB1747 6B 113.7 5.46E-04 4.7
IWB30381 6B 113.7 7.14E-04 4.4
IWB41515 6B 113.7 4.78E-05 4.2
IWB57727 6B 113.7 7.14E-04 4.2
IWB58200 6B 113.7 3.42E-04 4.2
IWB59006 6B 113.7 1.88E-05 4.2
IWB59306 6B 113.7 6.29E-07 4.1
IWB70316 6B 113.7 2.35E-04 4.1
IWB72471 6B 113.7 1.52E-04 4.1
IWB9416 6B 113.7 4.59E-06 4.1
IWA4245 6B 114.4 2.10E-04 4.0
IWA4246 6B 116.2 8.75E-04 3.9
IWB28557 6B 116.2 4.91E-04 3.9
IWB59175.2 6B 119.0 4.47E-04 3.9
IWB24880 6B 120.3 1.35E-04 3.8
IWB24881 6B 120.3 8.13E-04 3.7
IWB41216 6B 120.3 7.51E-04 3.7
IWB24882 6B 120.6 1.35E-04 3.5
IWB3553 6B 120.6 5.79E-05 3.5
IWB45581 6B 120.6 2.20E-05 3.5
IWB46893 6B 120.6 9.30E-05 3.5
IWB66027 6B 120.6 5.14E-07 3.4
IWB10711.2 6B 121.8 2.38E-08 3.4
IWB23602 6B 121.8 1.39E-04 3.4
IWB23603 6B 121.8 1.86E-04 3.4
IWB40587 6B 121.8 1.69E-04 3.4
IWB44802 6B 121.8 1.57E-06 3.3
IWB73072 6B 121.8 2.25E-08 3.3
IWB48548 6B 121.9 1.57E-06 3.3
IWB28880 6B 122.1 1.57E-06 3.3
IWB44669 6B 122.1 1.08E-07 3.3
IWB464 6B 122.1 7.18E-04 3.3
IWB71190 6B 122.2 2.71E-04 3.2
IWB43213 6B 122.3 1.69E-04 3.2
IWB41217 6B 122.9 6.96E-04 3.2
IWB47075 6B 122.9 6.28E-09 3.2
IWB34899.2 7A 6.4 3.22E-05 5.0
  1. a Chr ‘0’ indicates unmapped SNPs that were significant in the analysis
  2. b R2 Indicates the percent of phenotypic variation explained by the significant locus
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BMC Plant Biology

ISSN: 1471-2229

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