Polymorphic in Black Raspberry | Polymorphic in Red Raspberry | Number of alleles in Black Raspberry | Number of alleles in Red Raspberry | Amplicon size range Black Raspberry (bp) | Amplicon size range Red Raspberry (bp) | Distinguish between species? | Comments | |
---|---|---|---|---|---|---|---|---|
RI_CHEa0001J04f | y | y | 8 | 9 | 129–335 | 128–334 | y | |
RI_CHEa0001K23f | y | y | 7 | 9 | 101–300 | 102–300 | y | |
RI_CHEa0001M05f | y | y | 10 | 9 | 138–344 | 139–343 | y | |
RI_CHEa0001N07f | y | y | 7 | 7 | 124–383 | 124–386 | y | |
RI_CHEa0002A10f | y | y | 9 | 12 | 127–266 | 127–269 | y | |
RI_CHEa0002G14f | y | y | 7 | 8 | 127–281 | 122–277 | y | |
RI_CHEa0002J02f | y | unk | 3 | 2 | 130–233 | 174–182 | y | |
RI_CHEa0002K01f | y | y | 18 | 14 | 117–395 | 117–392 | y | |
RI_CHEa0002L24f | y | y | 8 | 8 | 112–264 | 113–265 | y | |
RI_CHEa0002N01f | y | y | 3 | 4 | 171–372 | 135–292 | y | |
RI_CHEa0003H23f | y | y | 11 | 10 | 117–321 | 117–298 | y | |
RI_CHEa0003N21f | y | y | 10 | 13 | 131–295 | 117–295 | y | |
RI_CHEa0003O01f | y | y | 22 | 19 | 108–393 | 108–387 | y | |
RI_CHEa0004B20f | y | y | 7 | 6 | 180–297 | 191–332 | y | |
RI_CHEa0004H20f | y | y | 17 | 15 | 110–390 | 110–385 | y | |
RI_CHEa0004L23f | y | y | 10 | 11 | 112–403 | 112–383 | y | |
RI_CHEa0004P08f | y | y | 5 | 6 | 132–153 | 131–154 | y | |
RI_CHEa0005M24f | y | y | 11 | 13 | 179–402 | 176–395 | y | |
RO_CBEa0002O01f | y | y | 6 | 9 | 110–330 | 110–334 | y | |
RO_CBEa0004M17f | y | n | 4 | 2 | 111–331 | 111–322 | y | Polymorphism in black raspberry needs validation |
RO_CBEa0005H05f | y | unk | 7 | 7 | 134–315 | 142–319 | y | Inconsistent amplification for Heritage |
RO_CBEa0005I06f | y | y | 10 | 8 | 102–327 | 110–284 | y | Polymorphism in black raspberry needs validation |
RO_CBEa0006A02f | y | y | 6 | 6 | 110–290 | 107–292 | y | Poor amplification in one Bristol replicate |
RO_CBEa0007C05f | y | y | 7 | 12 | 110–329 | 109–332 | y | Poor amplification in one Bristol replicate |
RO_CBEa0007K08f | y | y | 3 | 5 | 254–317 | 130–317 | y | Inconsistent amplification in ZIH–e1 |
RO_CBEa0008E02f | y | y | 13 | 12 | 115–415 | 117–415 | y | |
RO_CBEa0008O22f | y | y | 5 | 5 | 120–290 | 122–279 | y | Inconsistent amplification in Preston_2; only one replicate of ZIH–e1 |
RO_CBEa0009K12f | y | y | 2 | 4 | 160–184 | 155–355 | y | Polymorphism in black raspberry needs validation; inconsistent amplification in Heritage |
RO_CBEa0009N10f | y | y | 11 | 11 | 108–298 | 108–295 | y | |
RO_CBEa0010G06f | y | y | 15 | 15 | 108–287 | 115–287 | y | Poor amplification in one ZIH–e1 and one Bristol replicate |
RO_CBEa0010M20f | y | y | 16 | 14 | 115–415 | 115–415 | y | |
RI_CHEa0001H16f | n | n | 1 | 4 | 283 | 103–286 | y | Poor amplification for Bristol, Preston_2, and Heritage |
RI_CHEa0003C04f | n | y | 1 | 3 | 260 | 254–260 | y | Poor amplification for Bristol and Preston_2 |
RI_CHEa0005E12f | n | n | 1 | 1 | 278 | 278 | n | |
RI_CHEa0005K13f | n | n | 1 | 1 | 277 | 277 | n | |
RI_CHEa0005P17f | n | y | 2 | 3 | 226–256 | 226–308 | y | |
RO_CBEa0001B17f | n | y | 2 | 2 | 153–160 | 157–248 | y | One replicate of Preston_2 failed |
RO_CBEa0003P15f | n | n | 7 | 7 | 110–318 | 110–318 | n | Poor amplification in one Preston_2 replicate |
RO_CBEa0008G23f | n | y | 5 | 6 | 107–219 | 107–269 | y | |
RI_CHEa0001C22f | unk | n | unk | 1 | 151 | unk | Poor amplification for Bristol, Preston_2, and ZIH–e1 | |
RI_CHEa0002D18f | unk | unk | unk | unk | unk | unk | unk | Poor amplification for all samples |
RI_CHEa0002G20f | unk | n | unk | 1 | unk | 279 | unk | Poor amplification for all samples |
RI_CHEa0002H09f | unk | unk | unk | unk | unk | unk | unk | Poor amplification for all samples |
RI_CHEa0002H15f | unk | unk | unk | unk | unk | unk | unk | Data for Bristol and Heritage only; only one replicate of Heritage amplified; poor amplification. |
RI_CHEa0002L16f | unk | unk | unk | unk | unk | unk | unk | Poor amplification for all samples |
RI_CHEa0003D14f | unk | n | 3 | 3 | 172–201 | 172–201 | n | Only one black raspberry replicate (Bristol) was successful; poor amplification for ZIH–e1 |
RI_CHEa0004B18f | unk | unk | unk | unk | unk | unk | unk | Poor amplification for all samples |
RI_CHEa0004N08f | unk | unk | unk | unk | unk | unk | unk | Poor amplification for all samples |
RI_CHEa0004P09f | unk | n | 7 | 8 | 114–384 | 112–391 | y | Only data for black raspberry is Bristol; poor amplification for ZIH–e1 |
RI_CHEa0005B17f | unk | unk | 3 | 2 | 281–362 | 190, 281 | y | Poor amplification for Bristol and Heritage. |
RI_CHEa0005I04f | unk | unk | 10 | 10 | 141–395 | 140–389 | unk | Only one black raspberry replicate (Preston_2) was successful; poor amplification for ZIH-e1 |
RI_CHEa0005P15f | unk | unk | 3 | 3 | 129–140 | 129–213 | y | Only one red raspberry replicate (ZIH-e1) was successful; poor amplification for Bristol |
RO_CBEa0001C08f | unk | unk | 3 | 3 | 123–291 | 120–285 | y | Both Bristol and one Preston_2 replicates failed; poor amplification for Heritage |
RO_CBEa0001L10f | unk | y | 14 | 12 | 115–298 | 122–298 | y | One replicate of Bristol failed; inconsistent amplification for Preston_2 |
RO_CBEa0002K20f | unk | unk | 5 | 8 | 140–315 | 138–315 | y | Poor amplification in both Bristol replicates; inconsistent amplification for Preston_2, Heritage and ZIH-e1 |
RO_CBEa0002P20f | unk | unk | unk | unk | unk | unk | unk | One replicate of Bristol failed; poor amplification in second Bristol and one Heritage replicate |
RO_CBEa0005J12f | unk | y | 6 | 4 | 123–284 | 149–179 | y | Only one black raspberry sample (Bristol) was successful |
RO_CBEa0005J24f | unk | unk | 6 | 7 | 162–485 | 159–486 | y | Inconsistent amplification for all samples |
RO_CBEa0005N17f | unk | y | 6 | 7 | 110–290 | 109–293 | y | Poor amplification in one Bristol replicate |
RO_CBEa0006C18f | unk | y | 2 | 6 | 133–252 | 133–256 | y | Poor amplification in both Bristol replicate; inconsistent amplification for Preston_2 |