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Table 4 GO terms associated with upregulated DEGs in the root tips that were enriched (FDR ≤ 0.05) in at least one of the genotypes and used to select candidate genes with putative functions in drought responses in willows

From: Genome-wide transcriptional and physiological responses to drought stress in leaves and roots of two willow genotypes

GO-ID

Term

FDR

No of genes in test set

No of genes in ref set

  

Genotype 592/520

Genotype 592/520

Genotype 592/520

GO:0009628

Response to abiotic stimulus

7.9 × 10−3/1.8 × 10−3

106/114

1004/996

GO:0009644

Response to high light intensity

2.4 × 10−2/2.6 × 10−2

15/15

73/73

GO:0009642

Response to light intensity

4.9 × 10−3/5.7 × 10−3

19/19

90/90

GO:0009636

Response to toxic substance

3.5 × 10−2/-

5/-

8/-

GO:0009415

Response to water

4.9 × 10−2/-

17/-

96/-

GO:0042538

Hyperosmotic salinity response

-/3.2 × 10−2

-/9

-/31

GO:0098542

Defense response to other organism

-/9.3 × 10−3

-/47

-/342

GO:0009637

Response to blue light

-/1.8 × 10−5

-/19

-/51

GO:0010218

Response to far red light

-/1.1 × 10−4

-/15

-/37

GO:0009416

Response to light stimulus

-/1.4 × 10−2

-/55

-/432

GO:0009314

Response to radiation

-/2.6 × 10−2

-/57

-/466

GO:0010114

Response to red light

-/5.1 × 10−5

-/14

-/29

GO:0051788

Response to misfolded protein

-/3.4 × 10−2

-/0

-/93

GO:0002679

Respiratory burst involved in defense response

2.5 × 10−2/-

7/-

19/-

GO:0006974

Cellular response to DNA damage stimulus

4.9 × 10−2/1.9 × 10−2

6/6

256/256