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Table 1 Repeat library composition and abundance estimate

From: Identification and characterization of abundant repetitive sequences in Eragrostis tef cv. Enatite genome

Repeat class

Number of sequences in rpt library

Estimated abundance in genome (%)

Class I

LTR-RT (all)

442

14.96

Ty1-copia

169

2.67

Ty3-gypsy

236

11.40

Unclassified LTR-RT

37

0.89

Non-LTR retroelements

25

0.12

SINEs

7

0.18

Class II

DNA TE (including MITEs)

127

2.33

 

Other TEs

14

0.89

 

Satellite

3

4.54

 

Uncharacterized

771

4.44

 

Total

1389

27.46