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Table 1 Total number of sequencing reads mapped to genes in TAIR 10.0

From: Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination

 

T0

T1

T8

Map to gene

Reads number

Percentage

Reads number

Percentage

Reads number

Percentage

Total Reads

65856848

100.00 %

68717410

100.00 %

66618050

100.00 %

Total Base Pairs

5927116320

100.00 %

6184566900

100.00 %

5995624500

100.00 %

Total Mapped Reads

50220939

76.26 %

54644882

79.52 %

52800526

79.26 %

Perfect match

39421448

59.86 %

43404340

63.16 %

42190196

63.33 %

<= 5 bp mismatch

10799491

16.40 %

11240542

16.36 %

10610330

15.93 %

Unique match

40502486

61.50 %

43070199

62.68 %

42066874

63.15 %

Multi-position match

9718453

14.76 %

11574683

16.84 %

10733652

16.11 %

Total Unmapped Reads

15635909

23.74 %

14072528

20.48 %

13817524

20.74 %