Table 2 Total number of sequencing reads mapped to genome in TAIR 10.0
| Â | T0 | T1 | T8 | |||
|---|---|---|---|---|---|---|
Map to genome | Reads number | Percentage | Reads number | Percentage | Reads number | Percentage |
Total Reads | 65856848 | 100.00Â % | 68717410 | 100.00Â % | 66618050 | 100.00Â % |
Total Base Pairs | 5927116320 | 100.00Â % | 6184566900 | 100.00Â % | 5995624500 | 100.00Â % |
Total Mapped Reads | 56308614 | 85.50Â % | 59953853 | 87.25Â % | 58351588 | 87.59Â % |
Perfect match | 43870842 | 66.62Â % | 47185072 | 68.67Â % | 46153587 | 69.28Â % |
<= 5Â bp mismatch | 12437772 | 18.89Â % | 12768781 | 18.58Â % | 12198001 | 18.31Â % |
Unique match | 53873689 | 81.80Â % | 57434680 | 83.58Â % | 55751167 | 83.69Â % |
Multi-position match | 2434925 | 3.70Â % | 2519173 | 3.67Â % | 2600421 | 3.90Â % |
Total Unmapped Reads | 9548234 | 14.50Â % | 8763557 | 12.75Â % | 8266462 | 12.41Â % |