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Table 2 Total number of sequencing reads mapped to genome in TAIR 10.0

From: Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination

  T0 T1 T8
Map to genome Reads number Percentage Reads number Percentage Reads number Percentage
Total Reads 65856848 100.00 % 68717410 100.00 % 66618050 100.00 %
Total Base Pairs 5927116320 100.00 % 6184566900 100.00 % 5995624500 100.00 %
Total Mapped Reads 56308614 85.50 % 59953853 87.25 % 58351588 87.59 %
Perfect match 43870842 66.62 % 47185072 68.67 % 46153587 69.28 %
<= 5 bp mismatch 12437772 18.89 % 12768781 18.58 % 12198001 18.31 %
Unique match 53873689 81.80 % 57434680 83.58 % 55751167 83.69 %
Multi-position match 2434925 3.70 % 2519173 3.67 % 2600421 3.90 %
Total Unmapped Reads 9548234 14.50 % 8763557 12.75 % 8266462 12.41 %
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BMC Plant Biology

ISSN: 1471-2229

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