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Table 4 QTL detected for RPR, IVDMD in DH and haploid populations, respectively

From: Ploidy effect and genetic architecture exploration of stalk traits using DH and its corresponding haploid populations in maize

Traitsa

Bin

Position(cM)b

Support interval (cM)

Flanking markers c

LOD

Ad

P G (%)

RPRhaploid

1.07

46.80

46.59–47.06

PZE_101169244

PZE_101164570

3.04

−1.41

6.60

RPRDH

1.10

59.40

59.39–60.29

PZE_101080378

PZE_101085696

3.5

1.56

9.00

RPRhaploid

2.02

54.20

53.64–56.99

PZE_102030524

PZE_102039914

7.09

2.15

15.70

RPRhaploid

3.09

160.00

157–161.64

PZE_103165581

ZM012337_0431

4.78

1.75

10.30

RPRhaploid

5.01

20.40

19.83–24.26

PZA01570.1

SYN25466

5.02

−1.76

10.30

RPRDH

5.05

101.00

97.79–101.52

PZA00987.1

SYN31361

6.32

−2.18

16.90

IVDMDDH

1.04/1.07

55.90

55.29–56.42

PZE_101179982

SYN3987

8.4

3.35

18.50

IVDMDDH

2.02/2.03

58.70

53.64–62.59

PZE_102030524

PZE_102039914

3.91

−1.98

8.60

IVDMDhaploid

5.04

81.50

80.92–81.57

PZE_105099416

PZE_105077111

3.14

1.26

6.80

IVDMDhaploid

6.03

47.80

39.16–50.73

PZE_106041753

PZE_106051230

3.69

−1.45

8.00

IVDMDDH

8.04

82.70

82.42–83.23

PZE_108068741

PZE_108069579

6.49

2.48

16.00

IVDMDhaploid

8.05

85.40

84.79–85.70

PZE_108069355

PZE_108074750

8.09

2.08

18.60

  1. a DH QTL detected in DH population, haploid QTL detected in Haploid population
  2. b The peak position with the highest LOD of each QTL
  3. c The Flanking markers of the identified QTL according to B73 reference sequence Version 5.60
  4. d Estimate of allele effect
  5. QTL shown in one frame represented that the genetic distance between them was less than 20 cM