Table 1 Summary of RNA-seq/sRNA-seq data
RNA-seq data | sRNA-seq data (18 to 28-nt) | |||
|---|---|---|---|---|
Sample replicate | Trimmed reads | Uniquely mapping reads to de novo transcriptome [%] | Trimmed reads | Distinct reads |
S1a | 70,216,602 | 39.442 | 10,425,301 | 1,813,927 |
S1b | 75,697,405 | 38.307 | 10,247,910 | 2,332,967 |
S1c | 55,646,245 | 34.298 | 9,892,496 | 2,983,585 |
S2a | 66,434,325 | 42.742 | 10,707,291 | 3,092,207 |
S2b | 66,122,827 | 43.012 | 9,718,833 | 2,572,135 |
S2c | 73,711,917 | 42.240 | 10,154,174 | 3,174,185 |
S3a | 71,321,690 | 44.759 | 10,789,357 | 2,908,387 |
S3b | 70,400,647 | 50.624 | 10,664,717 | 3,063,376 |
S3c | 58,681,677 | 40.775 | 9,939,297 | 4,006,577 |