Vine nitrogen status and volatile thiols and their precursors from plot to transcriptome level

Helwi, Pierre; Guillaumie, Sabine; Thibon, Cécile; Keime, Céline; Habran, Aude; Hilbert, Ghislaine; Gomes, Eric; Darriet, Philippe; Delrot, Serge; van Leeuwen, Cornelis

doi:10.1186/s12870-016-0836-y

BMC Plant Biology

Table 4 Glutathione-S-transferase and carboxypeptidase genes differentially expressed between the control and the soil N100 treatment at mid-ripening (v + 28) or ripeness (v + 35) in (a) 2013 and (b) 2014

From: Vine nitrogen status and volatile thiols and their precursors from plot to transcriptome level

A
V1_ID	Best identity description	LFC
		(v + 28)	(v + 35)
Putative Glutathione-S-transferase (Bincode 26.9)
VIT_01s0026g02400	GSTU10-like	ns	0.79
VIT_06s0004g05680	GSTU7-like	ns	0.68
VIT_07s0104g01800	GSTF13-like	0.87	ns
VIT_12s0035g02100	GSTZ2-like	ns	−0.94
VIT_16s0039g01070	GSTU8-like	0.79	ns
VIT_19s0015g02680	GSTU25-like	0.94	ns
VIT_19s0015g02690	GSTU25-like	ns	0.79
Putative carboxypeptidase (Bincode 29.5)
VIT_00s0187g00120	Putative cysteine protease inhibitor	0.63	ns
VIT_00s0265g00070	Ubiquitin-protein ligase	−0.71	ns
VIT_00s0323g00100	Cysteine-type endopeptidase	ns	−0.61
VIT_00s2015g00020	F-box protein FBW2-like	1.12	ns
VIT_00s2507g00010	F-box protein FBW2-like	2.26	0.81
VIT_01s0010g02860	Mitochondrial chaperone BCS1-like	ns	−0.90
VIT_01s0011g02000	Serine carboxypeptidase-like 35	ns	0.71
VIT_01s0137g00330	Putative cysteine proteinase	ns	−0.93
VIT_01s0150g00330	U-box domain-containing protein 43-like	ns	0.79
VIT_03s0088g00260	Serine carboxypeptidase 16-like	ns	0.91
VIT_03s0091g01290	Serine carboxypeptidase 18-like	1.06	1.09
VIT_04s0043g00840	Ubiquitin-protein ligase	−0.72	ns
VIT_05s0020g05000	Serine-type endopeptidase inhibitor	ns	1.46
VIT_06s0061g00710	Zinc finger family protein	0.99	0.87
VIT_06s0080g00150	Serine-type endopeptidase	ns	0.73
VIT_07s0104g00180	Putative extracellular dermal glycoprotein	0.67	ns
VIT_08s0007g00120	Ubiquitin-protein ligase	0.60	ns
VIT_08s0007g02470	Aspartyl protease family protein	ns	0.68
VIT_08s0040g01140	Putative serine carboxypeptidase	1.19	ns
VIT_08s0058g00700	F-box family protein	ns	−0.64
VIT_10s0116g00560	Polyphenol oxidase	1.60	2.19
VIT_11s0016g03010	Peptidase family protein	ns	0.62
VIT_13s0019g05120	Cysteine proteinase 15A-like	ns	−0.75
VIT_13s0047g00200	Xylem serine proteinase 1-like	ns	0.84
VIT_14s0006g00180	Aspartic proteinase nepenthesin-2-like	−0.80	ns
VIT_14s0219g00210	Ubiquitin family protein	−0.74	ns
VIT_15s0046g02160	Peptidase family protein	0.64	0.66
VIT_18s0001g00510	Serine-type endopeptidase	ns	0.70
VIT_18s0041g00370	Cysteine proteinase inhibitor 1-like	0.85	ns
VIT_19s0085g01110	Putative aspartic proteinase	ns	1.19
B
V1_ID	Best identity description	LFC
		(v + 28)	(v + 35)
Putative carboxypeptidase (Bincode 29.5)
VIT_14s0066g01950	Metalloendoproteinase 1-like	ns	−0.62

p value ≤ 0.05 and │LFC│ ≥ 0.6. C control. ns not significant

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ISSN: 1471-2229

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